Information on SUBCLASS 1.1.39 |
Subclass Accession number: 7055
Subclass: 1.1.39 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 22.7 +/- 26.3 Average RMSD (Å) : 0.500 +/- 0.283 Consensus geometry
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Consensus Sequence: | hpphp |
(φψ)-conformation: | bbpaa |
Pattern: | [KV] | [ACGI] | x | x | [CF] | [DS] | x | [AP] | [DKQ] | [AV] | [FIVY] |
Conservation: | -0.347 | -1.195 | -1.195 | -0.791 | 1.225 | 0.757 | -1.065 | 1.640 | 0.235 | 0.663 | 0.074 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dp4_A_209 | 1dp4 | A | 209 | 219 | VIYICSSPDAF | EEEEES-HHHH | xbbbbbxaaaa |
1fp1_D_235 | 1fp1 | D | 235 | 245 | KGINFDLPQVI | EEEEEE-HHHH | xxbxbbpaaaa |
1fp2_A_214 | 1fp2 | A | 214 | 224 | KCIVFDRPQVV | EEEEEE-HHHH | xbbxbbxaaaa |
1req_B_564 | 1req | B | 564 | 574 | VADLCSSAKVY | EEEEE--HHHH | bbbxbbxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fp1_D_235 | 1fp1 | D | SAHS-ADENOSYL-L-HOMOCYSTEINE | F - 239 |
1fp1_D_235 | 1fp1 | D | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 240 |
1fp1_D_235 | 1fp1 | D | SAHS-ADENOSYL-L-HOMOCYSTEINE | L - 241 |
1fp1_D_235 | 1fp1 | D | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 244 |
1fp2_A_214 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | F - 218 |
1fp2_A_214 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 219 |
1fp2_A_214 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | R - 220 |
1fp2_A_214 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 223 |
Clusters included in this Subclass |
CLUSTER: EH.1.91 |