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Information on SUBCLASS 1.2.5
Subclass Accession number: 7084
Subclass: 1.2.5 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 30.1 +/- 25.0
Average RMSD (Å) : 0.490 +/- 0.228

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: GXSph
(φψ)-conformation: bbeaa
Pattern: x[AIL][AGIMVY][AG][efh][GS][chqty][AGT][GT]xxxxx[aflvy][ASTV]
Conservation:-0.7060.708-0.5851.647-0.6321.317-0.6900.7091.942-1.195-0.9330.295-0.697-0.924-0.5180.261
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8q_*_881a8q   -89104TLVAHSMGGGELARYVEEEEETTHHHHHHHHHbxbbbeaaaaaaaaaa
1b93_A_411b93   A4156VLYATGTTGNLISRATEEEEETTHHHHHHHHHbbbbxeaaaaaaaaaa
1brt_*_921brt   -93108VLVGFSTGTGEVARYVEEEEEGGGHHHHHHHHbxbbbeaaaaaaaaaa
1cpy_*_1401cpy   -141156HIAGASYAGHYIPVFAEEEEETTHHHHHHHHHbbbebeaaaaaaaaaa
1cvl_*_811cvl   -8297NLIGHSQGGLTSRYVAEEEEETTHHHHHHHHHbbbbbeaaaaaaaaaa
1ei9_A_1091ei9   A110125NAMGFSQGGQFLRAVAEEEEETTHHHHHHHHHxbbbbeaaaaaaaaaa
1ex9_A_761ex9   A7792NLIGHSHGGPTIRYVAEEEEETTHHHHHHHHHbxbbbeaaaaaaaaaa
1fj2_A_1081fj2   A109124ILGGFSQGGALSLYTAEEEEETHHHHHHHHHHbbbbbeaaaaaaaaaa
1qj4_A_741qj4   A7590ILVGESCGGLNIAIAAEEEEETTHHHHHHHHHbxbbxeaaaaaaaaaa
1wht_A_1391wht   A141156YIAGESYAGHYVPELSEEEEETTHHHHHHHHHbbbbbeaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b93_A_411b93   A     FMTFORMIC ACID A - 44
1b93_A_411b93   A     FMTFORMIC ACID T - 45
1b93_A_411b93   A     FMTFORMIC ACID G - 46
1b93_A_411b93   A     FMTFORMIC ACID T - 47
1b93_A_411b93   A     FMTFORMIC ACID T - 48
1b93_A_411b93   A     FMTFORMIC ACID G - 49
1ei9_A_1091ei9   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 126
1ei9_A_1091ei9   A     NAGN-ACETYL-D-GLUCOSAMINE R - 127
1ex9_A_761ex9   A     OCPOCTYL-PHOSPHINIC ACID 1,2-BIS-OCTYLCARBAMOYLOXY-ETHYL ESTER H - 81
1ex9_A_761ex9   A     OCPOCTYL-PHOSPHINIC ACID 1,2-BIS-OCTYLCARBAMOYLOXY-ETHYL ESTER S - 82
1ex9_A_761ex9   A     OCPOCTYL-PHOSPHINIC ACID 1,2-BIS-OCTYLCARBAMOYLOXY-ETHYL ESTER H - 83
1ex9_A_761ex9   A     OCPOCTYL-PHOSPHINIC ACID 1,2-BIS-OCTYLCARBAMOYLOXY-ETHYL ESTER G - 84
1qj4_A_741qj4   A     GOLGLYCEROL E - 79
1qj4_A_741qj4   A     GOLGLYCEROL S - 80
1qj4_A_741qj4   A     GOLGLYCEROL C - 81
1qj4_A_741qj4   A     GOLGLYCEROL G - 82
1wht_A_1391wht   A     BZSL-BENZYLSUCCINIC ACID E - 145
1wht_A_1391wht   A     BZSL-BENZYLSUCCINIC ACID S - 146
1wht_A_1391wht   A     BZSL-BENZYLSUCCINIC ACID Y - 147
1wht_A_1391wht   A     BZSL-BENZYLSUCCINIC ACID A - 148
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1a8q_*_881a8q   * NULCATALYTIC TRIAD.S - 94
1brt_*_921brt   * NULCATALYTIC TRIAD.S - 98
1cvl_*_811cvl   * ACTTHE CATALYTIC TRIAD OF THE ACTIVE CENTER CONSISTS OF THE RESIDUES SER 87 - HIS 285 - ASP 263, ALTHOUGH THEY ARE NOT EXPOSED TO THE SOLVENT, BUT A NARROW CHANNEL CONNECTS THEM WITH THE SURFACE.S - 87
1cvl_*_811cvl   * OXYPERFORMED OXYANION, STABILIZED BY THE AMIDE NITROGEN ATOMS OF LEU 17 AND GLN 88, ALREADY PRESENT IN CLOSED CONFORMATION OF THE LIPASE.Q - 88
1fj2_A_1081fj2   A ACAACTIVE SITE IN CHAIN AS - 114
1qj4_A_741qj4   A CATCATALYTIC TRIADS - 80

Clusters included in this Subclass
CLUSTER: EH.2.51
CLUSTER: EH.3.28