Information on SUBCLASS 1.2.9 |
Subclass Accession number: 7088
Subclass: 1.2.9 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 75.0 +/- 1.6 Average RMSD (Å) : 0.200 +/- 0.082 Consensus geometry
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Consensus Sequence: | LNDTH |
(φψ)-conformation: | pbeaa |
Pattern: | [KQY] | x | [AV] | [I] | [Q] | [L] | [N] | [D] | [T] | [H] | [P] | [AST] | [IL] | [A] | [I] | [PV] | [E] | [L] | x | [R] | [IV] | [FL] | [IV] | [D] |
Conservation: | -1.382 | -1.518 | -1.081 | 0.001 | 0.551 | 0.001 | 1.102 | 1.102 | 0.551 | 2.202 | 1.652 | -1.137 | -0.540 | 0.001 | 0.001 | -1.002 | 0.551 | 0.001 | -1.295 | 0.551 | -0.266 | -0.879 | -0.270 | 1.102 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c8k_A_332 | 1c8k | A | 332 | 355 | KVAIQLNDTHPSLAIPELMRVLVD | HEEEEEESSTTTTHHHHHHHHHHH | abbbbxxeaaaaaaaaaaaaaaaa |
1l5r_A_332 | 1l5r | A | 332 | 355 | QVAIQLNDTHPALAIPELMRIFVD | HEEEEEESSTTTTHHHHHHHHHHH | abbbxxxeaaaaaaaaaaaaaaaa |
1l5w_A_300 | 1l5w | A | 300 | 323 | YEVIQLNDTHPTIAIPELLRVLID | HEEEEEESSTTTTHHHHHHHHHHH | abbbxxbeaaaaaaaaaaaaaaaa |
1ygp_A_332 | 1ygp | A | 332 | 355 | QVAIQLNDTHPTLAIVELQRVLVD | HEEEEEESSTTTHHHHHHHHHHHH | abbbbxxeaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1l5r_A_332 | 1l5r | A | NBG1-N-ACETYL-BETA-D-GLUCOSAMINE | D - 339 |
1l5r_A_332 | 1l5r | A | NBG1-N-ACETYL-BETA-D-GLUCOSAMINE | H - 341 |
1l5w_A_300 | 1l5w | A | GLCGLUCOSE | D - 307 |
1l5w_A_300 | 1l5w | A | GLCGLUCOSE | H - 309 |
Clusters included in this Subclass |
CLUSTER: EH.5.100 |