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Information on SUBCLASS 5.3.3
Subclass Accession number: 712
Subclass: 5.3.3 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  3 (>50 %)  5 (>50 %)  
GO : GO:0003676 (>50 %)  GO:0003677 (>50 %)  GO:0004407 (>50 %)  GO:0016810 (>50 %)  GO:0016811 (>50 %)  GO:0017136 (>50 %)  GO:0019213 (>50 %)  
SCOP : 52466 (>50 %)  52467 (>50 %)  63984 (>50 %)  
 Number of loops: 10

Average sequence ID (%) : 11.5 +/- 12.9
Average RMSD (Å) : 0.910 +/- 0.281

Consensus geometry
d (Å): 3 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXXXXcpXX
(φψ)-conformation: bbpaalpbb
Pattern: xxxxxxxx[aden][DGN]x[adegpst]xx[AGKV]x
Conservation:-0.267-0.1180.127-0.583-1.238-0.5330.403-0.4360.4323.3520.066-0.510-0.134-0.5920.422-0.393
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ehi_A_2981ehi   A301316RMDFLLDENNVPYLGEEEEEEE-TT--EEEEEbbbbbbxaavxwbxab
1fc6_A_3991fc6   A400415IQTVVDLSDGSGVAVTEEEEEE-TTS-EEEEEbbbbxxbaavxbbxbx
1fjr_A_361fjr   A3853EYDFRILPDDSKQKVAEEEEEE-TTS-EEEEExbabbxbaavxbbxbp
1fzd_A_7041fzd   A705720LRVELEDWAGNEAYAEEEEEEE-TTS-EEEEExbbbbbxaavxbbbbb
1i1n_A_1891i1n   A191206LEQYDKLQDGSIKMKPEEEEEE-TTS-EEEEExbbbbbxaavxbbbbx
1io1_A_3041io1   A307322VKMSYTDNNGKTIDGGEEEEEE-TTS-EEEEEbbxbbbxaavxbbxbx
1jlr_A_831jlr   A8499QKKEVTTPLDVSYHGVEEEEEE-TTS-EEEEEbxbbbbxaavbxbxbb
1m4l_A_331m4l   A3550KLQIGRSYEGRPIYVLEEEEEE-TTS-EEEEEbbbaebxaavxxbbbx
1p1j_A_1141p1j   A114129TLKLGIDAEGNDVYAPEEEEEE-TTS-EEEEEbbxaebxaavbpbbbp
1rvk_A_111rvk   A1429TTRRHSDSAGHAHPGPEEEEEE-TTS-EEEEExbaxbbxaavxxbxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ehi_A_2981ehi   A     MGMAGNESIUM ION R - 301
1ehi_A_2981ehi   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID R - 301
1ehi_A_2981ehi   A     MGMAGNESIUM ION D - 303
1ehi_A_2981ehi   A     ADPADENOSINE-5'-DIPHOSPHATE D - 303
1ehi_A_2981ehi   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID D - 303
1ehi_A_2981ehi   A     ADPADENOSINE-5'-DIPHOSPHATE L - 305
1ehi_A_2981ehi   A     ADPADENOSINE-5'-DIPHOSPHATE G - 315
1ehi_A_2981ehi   A     MGMAGNESIUM ION E - 316
1ehi_A_2981ehi   A     ADPADENOSINE-5'-DIPHOSPHATE E - 316
1ehi_A_2981ehi   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID E - 316
1ehi_A_2981ehi   A     MGMAGNESIUM ION P - 317
1ehi_A_2981ehi   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID P - 317
1ehi_A_2981ehi   A     MGMAGNESIUM ION N - 318
1ehi_A_2981ehi   A     ADPADENOSINE-5'-DIPHOSPHATE N - 318
1ehi_A_2981ehi   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID N - 318
1jlr_A_831jlr   A     GTPGUANOSINE-5'-TRIPHOSPHATE F - 83
1jlr_A_831jlr   A     GTPGUANOSINE-5'-TRIPHOSPHATE F - 101
1rvk_A_111rvk   A     MSESELENOMETHIONINE F - 11
1rvk_A_111rvk   A     MSESELENOMETHIONINE R - 17
1rvk_A_111rvk   A     MSESELENOMETHIONINE H - 18
1rvk_A_111rvk   A     MSESELENOMETHIONINE D - 20
1rvk_A_111rvk   A     MSESELENOMETHIONINE H - 24
1rvk_A_111rvk   A     MSESELENOMETHIONINE A - 25
1rvk_A_111rvk   A     MSESELENOMETHIONINE H - 26
1rvk_A_111rvk   A     MSESELENOMETHIONINE P - 27
1rvk_A_111rvk   A     MSESELENOMETHIONINE Q - 35

Clusters included in this Subclass
CLUSTER: HA.4.43