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Information on SUBCLASS 2.6.5
Subclass Accession number: 7216
Subclass: 2.6.5 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 75.0 +/- 0.0
Average RMSD (Å) : 0.100 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: GSADLX
(φψ)-conformation: ebplaa
Pattern: [FL][IL][G][G][S][A][D][L][AT][P][S][N]
Conservation:-1.304-0.9880.9090.909-0.356-0.3560.909-0.356-1.4621.541-0.3560.909
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gpu_A_3761gpu   A376387LIGGSADLTPSNEEEEESS-HHHHxbbebxlaaaaa
1qgd_A_3751qgd   A375386FLGGSADLAPSNEEEEESS-HHHHpbbebxvaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpu_A_3761gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE A - 381
1gpu_A_3761gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE D - 382
1gpu_A_3761gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE L - 383
1qgd_A_3751qgd   A     TPPTHIAMINE DIPHOSPHATE A - 380
1qgd_A_3751qgd   A     TPPTHIAMINE DIPHOSPHATE D - 381
1qgd_A_3751qgd   A     TPPTHIAMINE DIPHOSPHATE L - 382
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gpu_A_3761gpu   A AC4THD BINDING SITE FOR CHAIN BD - 382
1qgd_A_3751qgd   A TPBCOFACTOR BINDINGD - 381

Clusters included in this Subclass
CLUSTER: EH.3.192