Information on SUBCLASS 3.2.5 |
Subclass Accession number: 7239
Subclass: 3.2.5 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 12.3 +/- 14.3 Average RMSD (Å) : 0.560 +/- 0.230 Consensus geometry
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Consensus Sequence: | hpXpphX |
(φψ)-conformation: | bbaapaa |
Pattern: | x | x | [CIV] | [DPQST] | x | [ADEST] | [dhs] | [EGP] | [itvw] | [ADQT] | [kl] | [ILY] | [ILW] |
Conservation: | -1.000 | -1.000 | 1.474 | -0.471 | -1.734 | -0.228 | -0.184 | 1.046 | -1.345 | -0.526 | 0.607 | 0.815 | 0.546 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dmh_A_200 | 1dmh | A | 200 | 212 | YGCPPEGPTQQLL | EE--TTSHHHHHH | bbxpaaxaaaaaa |
1dzf_A_177 | 1dzf | A | 177 | 188 | .RIQRADPVALYL | .EE-TT-HHHHHH | .bbxaapaaaaaa |
1efy_A_799 | 1efy | A | 802 | 814 | KVVDKDSEEAKII | EE--TTSHHHHHH | bxxxaabaaaaaa |
1hei_B_609 | 1hei | B | 609 | 619 | ..VTLTHPITKYI | ..EE--SHHHHHH | ..bbaaxaaaaaa |
1jqe_A_162 | 1jqe | A | 171 | 183 | IVVSGSSGWDKLW | EEE-TTSHHHHHH | bbxxaaxaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dmh_A_200 | 1dmh | A | FEFE (III) ION | Y - 200 |
1dmh_A_200 | 1dmh | A | MCT4-METHYLCATECHOL | Y - 200 |
1dmh_A_200 | 1dmh | A | LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE | Q - 210 |
1dmh_A_200 | 1dmh | A | LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE | L - 211 |
1dmh_A_200 | 1dmh | A | LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE | Q - 214 |
1jqe_A_162 | 1jqe | A | QUNQUINACRINE | V - 173 |
1jqe_A_162 | 1jqe | A | QUNQUINACRINE | W - 179 |
1jqe_A_162 | 1jqe | A | QUNQUINACRINE | W - 183 |
Clusters included in this Subclass |
CLUSTER: EH.4.105 |
CLUSTER: EH.5.147 |