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Information on SUBCLASS 1.1.12
Subclass Accession number: 73
Subclass: 1.1.12 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 8.9 +/- 9.8
Average RMSD (Å) : 0.567 +/- 0.208

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXGXX
(φψ)-conformation: aalbb
Pattern: [ILT]x[AGS][LTV]x[AK][AIV][ALV][HKR][EKP]x[G]xxx
Conservation:-0.173-0.7450.073-0.173-0.6630.3620.073-0.2540.400-0.009-0.8273.181-0.581-0.663-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f0x_A_1241f0x   A124137LYSLEKALKPLGRE.HHHHHHHHGGGTEE.aaaaaaaaaaavbb.
1gc0_A_1691gc0   A169183IAGVAKIARKHGATVHHHHHHHHGGGT-EEaaaaaaaaaaalxxx
1q4t_A_651q4t   A7791TEATVAVVHEKGMMAHHHHHHHHGGGTEEEaaaaaaaaaaavbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gc0_A_1691gc0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) D - 186
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A G - 65
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A G - 66
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A Y - 68
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A A - 70
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A E - 73
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A M - 74
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A T - 77
1q4t_A_651q4t   A     EGLETHYLENE GLYCOL T - 77
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A E - 78
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A V - 81
1q4t_A_651q4t   A     EGLETHYLENE GLYCOL V - 81
1q4t_A_651q4t   A     EGLETHYLENE GLYCOL V - 84
1q4t_A_651q4t   A     EGLETHYLENE GLYCOL H - 85
1q4t_A_651q4t   A     EGLETHYLENE GLYCOL M - 89
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A M - 90
1q4t_A_651q4t   A     EGLETHYLENE GLYCOL M - 90
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A A - 91
1q4t_A_651q4t   A     EGLETHYLENE GLYCOL A - 91
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A V - 92
1q4t_A_651q4t   A     EGLETHYLENE GLYCOL V - 92
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A G - 93
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A Q - 94
1q4t_A_651q4t   A     4CO4-HYDROXYPHENACYL COENZYME A F - 100

Clusters included in this Subclass
CLUSTER: HE.5.181