Information on SUBCLASS 5.11.2 |
Subclass Accession number: 734
Subclass: 5.11.2 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 7.8 +/- 10.3 Average RMSD (Å) : 1.275 +/- 0.287 Consensus geometry
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Consensus Sequence: | XcpppppXh |
(φψ)-conformation: | bbaabppbb |
Pattern: | [FMVW] | x | x | x | x | x | [DG] | [DEKR] | x | [DQSY] | [DEK] | [HST] | [ADEQ] | [CILV] | x | [FGV] | x |
Conservation: | 0.330 | -0.847 | -0.018 | 0.400 | -1.396 | -1.318 | 1.900 | 0.722 | -0.690 | -0.455 | 1.482 | 0.772 | 0.330 | 0.879 | 0.181 | -0.797 | -1.475 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1lj8_A_83 | 1lj8 | A | 83 | 99 | FTLYELGDTDDTEVRVI | EEEEE--SS----EEEE | bxxbxbbaaxbbbbbxb |
1qks_A_516 | 1qks | A | 518 | 534 | WFSVWNGKDQESALVVV | EEEEE--TTS--EEEEE | bbxbxbxaabxbbbbbb |
1rsy_*_223 | 1rsy | - | 226 | 242 | MAVYDFDRFSKHDIIGE | EEEEE--SSS--EEEEE | bbxbbxbaabxxxxabb |
4fiv_*_62 | 4fiv | - | 71 | 87 | VHLEIRDENYKTQCIFG | EEEEE--TTS---EEEE | xxbbxbbaabxxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qks_A_516 | 1qks | A | DHEHEME D | W - 522 |
Clusters included in this Subclass |
CLUSTER: HA.8.21 |