Information on SUBCLASS 5.14.1 |
Subclass Accession number: 737
Subclass: 5.14.1 ![]() Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation EC : 3.2 (>75 %) 3.2.1 (>75 %) 3.2.1.73 GO : GO:0004553 (>75 %) GO:0016798 (>75 %) GO:0042972 (>75 %) SCOP : 49898 (>75 %) 49899 (>75 %) 49925 (>75 %) 57015 (>75 %) 57196 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 13.6 +/- 15.1 Average RMSD (Å) : 0.740 +/- 0.378 Consensus geometry
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Consensus Sequence: | pXGpXXhpp |
(φψ)-conformation: | bbeapppbb |
Pattern: | [gvy] | [ALVY] | [AQT] | x | [DG] | [ADS] | x | [akt] | x | [fkt] | [ehm] |
Conservation: | -0.617 | 0.055 | 0.412 | -0.895 | 2.503 | 0.703 | -0.679 | 0.018 | -1.148 | -0.329 | -0.022 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gtf_A_19 | 1gtf | A | 23 | 33 | GLTRGADTRFH | EEE-SSS--EE | xbxxeabbbxa |
1juh_A_283 | 1juh | A | 284 | 294 | VVQIGDYAATE | EEEETTS--EE | xbbbeaxxpbx |
1oew_A_195 | 1oew | A | 200 | 210 | GYAVGSGTFKS | EEEETTS--EE | ebbbeaxxxbx |
1qba_*_151 | 1qba | - | 151 | 161 | YATSGDAKPKM | EEE-TTS--EE | bbbbeapxxbx |
2fbj_H_199 | 2fbj | H | 203 | 213 | SVQHDSNPVQE | EEEETTS--EE | bbbxeaxpxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | V - 21 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | I - 22 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | G - 23 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | L - 24 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | T - 25 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | R - 26 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | G - 27 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | A - 28 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | D - 29 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | T - 30 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | R - 31 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | H - 33 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | H - 34 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | S - 35 |
1gtf_A_19 | 1gtf | A | TRPTRYPTOPHAN | E - 36 |
1juh_A_283 | 1juh | A | EDO1,2-ETHANEDIOL | L - 295 |
1oew_A_195 | 1oew | A | SERSERINE | I - 216 |
2fbj_H_199 | 2fbj | H | NAGN-ACETYL-D-GLUCOSAMINE | S - 203 |
2fbj_H_199 | 2fbj | H | NAGN-ACETYL-D-GLUCOSAMINE | V - 204 |
2fbj_H_199 | 2fbj | H | NAGN-ACETYL-D-GLUCOSAMINE | Q - 205 |
2fbj_H_199 | 2fbj | H | NAGN-ACETYL-D-GLUCOSAMINE | V - 211 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gtf_A_19 | 1gtf | A | AC1TRP BINDING SITE FOR CHAIN A | G - 23 |
1gtf_A_19 | 1gtf | A | AC2TRP BINDING SITE FOR CHAIN B | T - 25 |
1gtf_A_19 | 1gtf | A | AC2TRP BINDING SITE FOR CHAIN B | T - 30 |
1oew_A_195 | 1oew | A | AC1SER BINDING SITE FOR CHAIN A | I - 216 |
Clusters included in this Subclass |
CLUSTER: HA.5.81 |