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Information on SUBCLASS 5.3.3
Subclass Accession number: 7454
Subclass: 5.3.3 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 17.1 +/- 16.3
Average RMSD (Å) : 1.160 +/- 0.305

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: phppGpphp
(φψ)-conformation: bbppgppaa
Pattern: [ders][FLV][ehks]x[DENR][IVY][ehqr][CTVY][KPST][EKPQ][G][TVY][DY][IPV][DHKR][ADST][AILM][CIKL]x[DNQ][AILMV][CGL][DENY][kl]
Conservation:-1.0330.370-0.966-1.0820.0780.727-0.797-0.471-0.2460.2683.9610.1340.518-0.139-0.062-0.0720.198-0.673-0.2550.6800.080-1.060-0.075-0.082
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f0x_A_4941f0x   A494517VFHQDYIVKKGVDVHALKEQMLELEEEEEEEEETT--HHHHHHHHHHHbbbbbbbxppvxxaaaaaaaaaaa
1i50_K_701i50   K7093RFKLRIQTTEGYDPKDALKNACNSEEEEEEEE-TTS-HHHHHHHHHHHbbbbbbbbppgxxaaaaaaaaaaa
1k8w_A_1671k8w   A167190ELELEIHCSKGTYIRTIIDDLGEKEEEEEEEE-TT--HHHHHHHHHHHbbbbbbbbxpvxxaaaaaaaaaaa
1lfw_A_3431lfw   A344367SLLNNVRYPQGTDPDTMIKQVLDKEEEEEEEE-TT--HHHHHHHHHHHbbbbxbbbwxgbbaaaaaaaaaaa
1r3e_A_1671r3e   A167190DVSFRVEVSPGTYIRSLCMDIGYKEEEEEEEE-TT--HHHHHHHHHHHxbbbbbbbxpvxbaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f0x_A_4941f0x   A     FADFLAVIN-ADENINE DINUCLEOTIDE H - 496
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE S - 175
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE K - 176
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE G - 177
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE T - 178
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE Y - 179
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE I - 180
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE R - 181
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE T - 182
1lfw_A_3431lfw   A     AEP3-[(1-AMINO-2-CARBOXY-ETHYL)-HYDROXY-PHOSPHINOYL]-2-METHYL-PROPIONIC ACID N - 348
1lfw_A_3431lfw   A     AEP3-[(1-AMINO-2-CARBOXY-ETHYL)-HYDROXY-PHOSPHINOYL]-2-METHYL-PROPIONIC ACID R - 350
1r3e_A_1671r3e   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE P - 176
1r3e_A_1671r3e   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE S - 182

Clusters included in this Subclass
CLUSTER: EH.4.110
CLUSTER: EH.6.84