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Information on SUBCLASS 5.4.1
Subclass Accession number: 7457
Subclass: 5.4.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 16

Average sequence ID (%) : 8.7 +/- 16.2
Average RMSD (Å) : 0.981 +/- 0.204

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXpXXhXXX
(φψ)-conformation: bbabpppaa
Pattern: [acfilv]xxx[AEKNQRST]xx[ACILMPY][acdpstv][adegnrs][dehpqrs]xx
Conservation:-0.253-0.384-0.465-0.4002.589-0.264-1.5570.670-0.170-0.4381.156-0.028-0.456
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cer_O_2711cer   O271283LAYTEDEIVLQDIEEEE-S---HHHHbbbbaxxxbaaaa
1ctt_*_1191ctt   -121133AITVNYTPCGHCREEEESS---HHHHbbbbabpxxaaaa
1dxy_*_471dxy   -4961NSLQTTPYAAGVFEE--SS-B-HHHHbbbbaxxbxaaaa
1g8m_A_3181g8m   A319331FIALSDICDVPTAEEEESS-B-HHHHbxbbabpxxaaaa
1gdh_A_1721gdh   A174186DYFDTHRASSSDEEEE-SS---HHHHbbbbabxxpaaaa
1j4a_A_491j4a   A5163VVYQQLDYIAETLEE--SS-B-HHHHbbbbappxxaaaa
1j8u_A_2411j8u   A242254LRPVAGLLSSRDFEEE--S---HHHHbbwbabxxxaaaa
1jhd_A_1951jhd   A197209AFQTRNPMHRAHEEEEESS---HHHHbbxbaxxxxaaaa
1l0g_A_3341l0g   A337349VMLANKNYPNPAREEEESB---HHHHbbbbabxbpaaaa
1mlw_A_2281mlw   A229241IRPVAGYLSPRDFEEE-SSB--HHHHbbxbabxxxaaaa
1psd_A_351psd   A3547IEFHKGALDDEQLEEE-SS---HHHHbbxbabxbxaaaa
1qlm_A_1351qlm   A138150CLESSELPDEDVAEEE-SS---HHHHbbxbabxxxaaaa
1sll_*_2501sll   -255267IKVYSNALSDEELEEEESS---HHHHbbbbaxxxxaaaa
2blt_A_3342blt   A337349VMLANTSYPNPAREEEESB---HHHHbbbbabxbpaaaa
2dld_A_492dld   A5163VVYQQLDYTADTLEE--SS-B-HHHHxbxbaxxxpaaaa
2nac_A_2162nac   A218230HYTDRHRLPESVEEEE-SS---HHHHbbbbabxxwaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ctt_*_1191ctt   *     DHZ3,4-DIHYDRO-1H-PYRIMIDIN-2-ONE NUCLEOSIDE V - 124
1ctt_*_1191ctt   *     DHZ3,4-DIHYDRO-1H-PYRIMIDIN-2-ONE NUCLEOSIDE Y - 126
1ctt_*_1191ctt   *     DHZ3,4-DIHYDRO-1H-PYRIMIDIN-2-ONE NUCLEOSIDE T - 127
1ctt_*_1191ctt   *     DHZ3,4-DIHYDRO-1H-PYRIMIDIN-2-ONE NUCLEOSIDE P - 128
1ctt_*_1191ctt   *     ZNZINC ION P - 128
1ctt_*_1191ctt   *     DHZ3,4-DIHYDRO-1H-PYRIMIDIN-2-ONE NUCLEOSIDE C - 129
1ctt_*_1191ctt   *     ZNZINC ION C - 129
1ctt_*_1191ctt   *     ZNZINC ION G - 130
1ctt_*_1191ctt   *     ZNZINC ION H - 131
1ctt_*_1191ctt   *     DHZ3,4-DIHYDRO-1H-PYRIMIDIN-2-ONE NUCLEOSIDE C - 132
1ctt_*_1191ctt   *     ZNZINC ION C - 132
1ctt_*_1191ctt   *     ZNZINC ION R - 133
1dxy_*_471dxy   *     COI2-OXO-4-METHYLPENTANOIC ACID L - 51
1dxy_*_471dxy   *     COI2-OXO-4-METHYLPENTANOIC ACID T - 53
1j4a_A_491j4a   A     SULSULFATE ANION Y - 53
1j4a_A_491j4a   A     SULSULFATE ANION Q - 55
1j8u_A_2411j8u   A     THBTETRAHYDROBIOPTERIN V - 245
1j8u_A_2411j8u   A     THBTETRAHYDROBIOPTERIN G - 247
1j8u_A_2411j8u   A     THBTETRAHYDROBIOPTERIN L - 248
1j8u_A_2411j8u   A     THBTETRAHYDROBIOPTERIN L - 249
1j8u_A_2411j8u   A     THBTETRAHYDROBIOPTERIN S - 250
1j8u_A_2411j8u   A     THBTETRAHYDROBIOPTERIN S - 251
1j8u_A_2411j8u   A     THBTETRAHYDROBIOPTERIN F - 254
1j8u_A_2411j8u   A     THBTETRAHYDROBIOPTERIN L - 255
1l0g_A_3341l0g   A     SUCSUCROSE N - 343
1mlw_A_2281mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN V - 232
1mlw_A_2281mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN G - 234
1mlw_A_2281mlw   A     FEFE (III) ION Y - 235
1mlw_A_2281mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN Y - 235
1mlw_A_2281mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN L - 236
1mlw_A_2281mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN S - 237
1mlw_A_2281mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN P - 238
1mlw_A_2281mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN R - 239
1mlw_A_2281mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN F - 241
1mlw_A_2281mlw   A     HBL7,8-DIHYDRO-L-BIOPTERIN L - 242
1qlm_A_1351qlm   A     PO4PHOSPHATE ION E - 140
1qlm_A_1351qlm   A     PO4PHOSPHATE ION H - 152
1qlm_A_1351qlm   A     PO4PHOSPHATE ION E - 156

Clusters included in this Subclass
CLUSTER: EH.5.206
CLUSTER: EH.5.49
CLUSTER: EH.6.10
CLUSTER: EH.6.75