Information on SUBCLASS 5.28.1 |
Subclass Accession number: 7490
Subclass: 5.28.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 40.5 +/- 28.2 Average RMSD (Å) : 0.280 +/- 0.130 Consensus geometry
|
Consensus Sequence: | ADLcpXpXp |
(φψ)-conformation: | pppbaapaa |
Pattern: | [A] | [D] | [FL] | [DNS] | [HQT] | [AENQ] | [NS] | [AGNS] | [TY] | [IV] | [ADQ] | [knqs] | [TY] | [FIL] | [AKT] | [ADS] | [AY] | [AI] | [kv] | x | [LW] | [lv] |
Conservation: | 1.448 | 2.932 | 0.371 | 0.272 | -0.411 | -0.763 | 1.139 | -0.562 | 0.061 | 1.077 | -0.636 | -1.224 | 0.573 | 0.030 | -0.654 | -0.360 | -0.275 | -0.106 | -0.954 | -1.403 | 0.295 | -0.850 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cgt_*_197 | 1cgt | - | 198 | 219 | ADFNHNNATIDKYFKDAIKLWL | EEB-TTSHHHHHHHHHHHHHHH | xxxbaaxaaaaaaaaaaaaaaa |
1ciu_*_198 | 1ciu | - | 199 | 220 | ADLNQQNSTIDSYLKSAIKVWL | EEB-TTSHHHHHHHHHHHHHHH | pxxbaaxaaaaaaaaaaaaaaa |
1d3c_A_197 | 1d3c | A | 198 | 219 | ADLNHNNSTVDVYLKDAIKMWL | EEB-TTSHHHHHHHHHHHHHHH | pxxbaaxaaaaaaaaaaaaaaa |
1g94_A_143 | 1g94 | A | 143 | 164 | ADLDTASNYVQNTIAAYINDLQ | EEB-TTSHHHHHHHHHHHHHHH | pxxxaaxaaaaaaaaaaaaaaa |
1qho_A_194 | 1qho | A | 197 | 218 | ADLSQENGTIAQYLTDAAVQLV | EEB-TTSHHHHHHHHHHHHHHH | xxxxaaxaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cgt_*_197 | 1cgt | * | CACALCIUM ION | D - 199 |
1cgt_*_197 | 1cgt | * | CACALCIUM ION | F - 200 |
1cgt_*_197 | 1cgt | * | CACALCIUM ION | H - 202 |
1ciu_*_198 | 1ciu | * | CACALCIUM ION | D - 200 |
1ciu_*_198 | 1ciu | * | CACALCIUM ION | L - 201 |
1ciu_*_198 | 1ciu | * | CACALCIUM ION | Q - 203 |
1d3c_A_197 | 1d3c | A | GLCGLUCOSE | L - 197 |
1d3c_A_197 | 1d3c | A | CACALCIUM ION | L - 200 |
1g94_A_143 | 1g94 | A | CACALCIUM ION | D - 144 |
1g94_A_143 | 1g94 | A | CACALCIUM ION | L - 145 |
1g94_A_143 | 1g94 | A | CACALCIUM ION | T - 147 |
1qho_A_194 | 1qho | A | ABDACARBOSE DERIVED HEXASACCHARIDE | F - 194 |
1qho_A_194 | 1qho | A | ABDACARBOSE DERIVED HEXASACCHARIDE | L - 196 |
1qho_A_194 | 1qho | A | CACALCIUM ION | D - 198 |
1qho_A_194 | 1qho | A | CACALCIUM ION | L - 199 |
1qho_A_194 | 1qho | A | CACALCIUM ION | Q - 201 |
Clusters included in this Subclass |
CLUSTER: EH.6.52 |