Logo
Information on SUBCLASS 5.57.1
Subclass Accession number: 7519
Subclass: 5.57.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 15.7 +/- 14.0
Average RMSD (Å) : 1.067 +/- 0.153

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXGDhXpXX
(φψ)-conformation: bbebaapaa
Pattern: x[LV]xx[G][D][AFV]x[NQS][AEN][AEM]xx[DES][KMR][ILT]x
Conservation:-0.6890.521-0.624-0.6892.4772.477-0.495-0.2010.086-0.431-0.624-0.431-0.8180.216-0.043-0.172-0.560
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1duv_G_1571duv   G158174LVYAGDARNNMGNSMLEEEEES-TTSHHHHHHHHbbbbexaaxaaaaaaaa
1hdo_A_491hdo   A4965HVVVGDVLQAADVDKTVEEEES-TTSHHHHHHHHbbbxebaabaaaaaaaa
1nw3_A_2161nw3   A217233TLERGDFLSEEWRERIAEEEE--TTSHHHHHHHHbbbxebaapaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1duv_G_1571duv   G     PSQNDELTA-(N'-SULPHODIAMINOPHOSPHINYL)-L-ORNITHINE N - 166
1duv_G_1571duv   G     PSQNDELTA-(N'-SULPHODIAMINOPHOSPHINYL)-L-ORNITHINE N - 167
1duv_G_1571duv   G     PSQNDELTA-(N'-SULPHODIAMINOPHOSPHINYL)-L-ORNITHINE M - 168
1hdo_A_491hdo   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 53
1hdo_A_491hdo   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 54
1hdo_A_491hdo   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 55
1hdo_A_491hdo   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 56
1nw3_A_2161nw3   A     SAMS-ADENOSYLMETHIONINE G - 221
1nw3_A_2161nw3   A     SAMS-ADENOSYLMETHIONINE D - 222
1nw3_A_2161nw3   A     SAMS-ADENOSYLMETHIONINE F - 223
1nw3_A_2161nw3   A     SAMS-ADENOSYLMETHIONINE L - 224
1nw3_A_2161nw3   A     ACTACETATE ION W - 228
1nw3_A_2161nw3   A     ACTACETATE ION R - 231
1nw3_A_2161nw3   A     ACTACETATE ION I - 232
1nw3_A_2161nw3   A     ACTACETATE ION N - 234
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hdo_A_491hdo   A AC1NAP BINDING SITE FOR CHAIN AD - 54

Clusters included in this Subclass
CLUSTER: EH.4.213