Information on SUBCLASS 5.28.1 |
Subclass Accession number: 752
Subclass: 5.28.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7.3 (>75 %) 2.7.3.2 GO : GO:0004111 (>50 %) GO:0016301 (>75 %) GO:0016775 (>75 %) SCOP : 55930 (>75 %) 55931 (>75 %) 55935 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 8.3 +/- 8.6 Average RMSD (Å) : 0.500 +/- 0.100 Consensus geometry
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Consensus Sequence: | XhhGpXXXX |
(φψ)-conformation: | bbpgbppbb |
Pattern: | [AIV] | [AFW] | [GMT] | [AFY] | [ACP] | [G] | [DKR] | [LPT] | [NPT] | [MTV] | x | [GMV] |
Conservation: | 0.127 | -0.101 | -0.785 | 0.051 | -0.177 | 3.013 | -0.025 | -0.633 | -0.177 | -0.025 | -0.557 | -0.709 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e8c_A_344 | 1e8c | A | 344 | 355 | VFTAPGKPTVVV | EE--TTS-EEEE | xbbbpvbxxbbb |
1k2x_B_294 | 1k2x | B | 298 | 309 | AWGYAGDTPTTG | EE--TTS--EEE | bbbxpvbxxbbb |
1mwp_A_33 | 1mwp | A | 34 | 45 | IAMFCGRLNMHM | EE--TTSB-EEE | bbbbpgbxxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e8c_A_344 | 1e8c | A | MSESELENOMETHIONINE | V - 344 |
1e8c_A_344 | 1e8c | A | MSESELENOMETHIONINE | K - 350 |
1e8c_A_344 | 1e8c | A | MSESELENOMETHIONINE | P - 351 |
1e8c_A_344 | 1e8c | A | MSESELENOMETHIONINE | V - 354 |
1e8c_A_344 | 1e8c | A | MSESELENOMETHIONINE | V - 355 |
1e8c_A_344 | 1e8c | A | MSESELENOMETHIONINE | D - 356 |
Clusters included in this Subclass |
CLUSTER: HA.7.70 |