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Information on SUBCLASS 5.28.1
Subclass Accession number: 752
Subclass: 5.28.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7.3 (>75 %)  2.7.3.2
GO : GO:0004111 (>50 %)  GO:0016301 (>75 %)  GO:0016775 (>75 %)  
SCOP : 55930 (>75 %)  55931 (>75 %)  55935 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 8.3 +/- 8.6
Average RMSD (Å) : 0.500 +/- 0.100

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XhhGpXXXX
(φψ)-conformation: bbpgbppbb
Pattern: [AIV][AFW][GMT][AFY][ACP][G][DKR][LPT][NPT][MTV]x[GMV]
Conservation:0.127-0.101-0.7850.051-0.1773.013-0.025-0.633-0.177-0.025-0.557-0.709
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e8c_A_3441e8c   A344355VFTAPGKPTVVVEE--TTS-EEEExbbbpvbxxbbb
1k2x_B_2941k2x   B298309AWGYAGDTPTTGEE--TTS--EEEbbbxpvbxxbbb
1mwp_A_331mwp   A3445IAMFCGRLNMHMEE--TTSB-EEEbbbbpgbxxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e8c_A_3441e8c   A     MSESELENOMETHIONINE V - 344
1e8c_A_3441e8c   A     MSESELENOMETHIONINE K - 350
1e8c_A_3441e8c   A     MSESELENOMETHIONINE P - 351
1e8c_A_3441e8c   A     MSESELENOMETHIONINE V - 354
1e8c_A_3441e8c   A     MSESELENOMETHIONINE V - 355
1e8c_A_3441e8c   A     MSESELENOMETHIONINE D - 356

Clusters included in this Subclass
CLUSTER: HA.7.70