Information on SUBCLASS 6.6.1 |
Subclass Accession number: 7531
Subclass: 6.6.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 15.3 +/- 16.2 Average RMSD (Å) : 1.367 +/- 0.462 Consensus geometry
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Consensus Sequence: | pXhcpphXXp |
(φψ)-conformation: | bbppaappaa |
Pattern: | [V] | [HK] | x | [LV] | [DKN] | [EST] | [DS] | [AL] | [PST] | x | [EKR] | [DEK] | x | x | [DE] | [FKL] | [ILY] | [ENS] | [ER] | [AEM] | x | x | x | [AK] |
Conservation: | 2.256 | 0.858 | -0.793 | 0.872 | 0.110 | -0.229 | 0.657 | -0.083 | -0.229 | -1.245 | 0.562 | 0.449 | -1.245 | -0.793 | 2.012 | -1.245 | -0.116 | 0.110 | 0.933 | -1.132 | -1.471 | -0.906 | 0.334 | 0.334 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fgk_A_508 | 1fgk | A | 513 | 536 | VKMLKSDATEKDLSDLISEMEMMK | EE---TT--HHHHHHHHHHHHHHH | bxbxxaaxxaaaaaaaaaaaaaaa |
1ir3_A_1022 | 1ir3 | A | 1029 | 1052 | VKTVNESASLRERIEFLNEASVMK | EEE--TT--HHHHHHHHHHHHHHH | bbbbpaapxaaaaaaaaaaaaaaa |
1pbt_A_99 | 1pbt | A | 99 | 122 | VHYVDTSLPIEKACEKYEREIRSA | EE---TTS-HHHHHHHHHHHHHHH | bbbxxaaxwaaaagUaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ir3_A_1022 | 1ir3 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | A - 1028 |
1ir3_A_1022 | 1ir3 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | K - 1030 |
1ir3_A_1022 | 1ir3 | A | MGMAGNESIUM ION | K - 1030 |
1ir3_A_1022 | 1ir3 | A | MGMAGNESIUM ION | E - 1043 |
1ir3_A_1022 | 1ir3 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | E - 1047 |
1ir3_A_1022 | 1ir3 | A | MGMAGNESIUM ION | E - 1047 |
1pbt_A_99 | 1pbt | A | TMNTRIS(HYDROXYMETHYL)AMINOMETHANE | V - 99 |
1pbt_A_99 | 1pbt | A | TMNTRIS(HYDROXYMETHYL)AMINOMETHANE | H - 100 |
1pbt_A_99 | 1pbt | A | TMNTRIS(HYDROXYMETHYL)AMINOMETHANE | Y - 101 |
1pbt_A_99 | 1pbt | A | TMNTRIS(HYDROXYMETHYL)AMINOMETHANE | V - 102 |
1pbt_A_99 | 1pbt | A | TMNTRIS(HYDROXYMETHYL)AMINOMETHANE | D - 103 |
1pbt_A_99 | 1pbt | A | TMNTRIS(HYDROXYMETHYL)AMINOMETHANE | K - 114 |
1pbt_A_99 | 1pbt | A | TMNTRIS(HYDROXYMETHYL)AMINOMETHANE | Y - 115 |
1pbt_A_99 | 1pbt | A | TMNTRIS(HYDROXYMETHYL)AMINOMETHANE | E - 118 |
1pbt_A_99 | 1pbt | A | FMTFORMIC ACID | I - 119 |
1pbt_A_99 | 1pbt | A | FMTFORMIC ACID | R - 120 |
Clusters included in this Subclass |
CLUSTER: EH.6.176 |