ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 7.8.1

Subclass Accession number: 7583
Subclass: 7.8.1

Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 5

Average sequence ID (%) : 63.6 +/- 18.7
Average RMSD (Å) : 0.260 +/- 0.089

Consensus geometry

d (Å): 13

delta (°): 45-90

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	EhhhDGpHDhp
(φψ)-conformation:	pbpapeappaa

Pattern:	[V]	[P]	[I]	[V]	[E]	[P]	[E]	[IV]	[ILM]	[AIP]	[D]	[G]	[DPT]	[H]	[DS]	[IL]	[DEK]	x	[AC]	[AQ]	x	[V]	[ST]	[EQ]	[HKT]	[V]	[LW]	[AS]	[ac]	[V]	[FVY]	[KS]	[A]	[L]	[HNQS]	[DER]
Conservation:	0.337	1.921	0.337	0.337	0.865	1.921	0.865	0.075	-0.392	-1.426	1.393	1.393	-1.055	2.449	-0.221	-0.188	-0.456	-1.640	0.519	-0.678	-1.599	0.337	-0.205	0.078	-1.158	0.337	-0.623	-0.450	-1.287	0.337	-0.575	-0.454	0.337	0.337	-0.968	-0.805

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a5c_A_190	1a5c	A	190	225	VPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQE	EEEEEEEEE--SS--HHHHHHHHHHHHHHHHHHHHH	xxxxbwxbxapeaxxaaaaaaaaaaaaaaaaaaaaa
1ado_A_183	1ado	A	183	218	VPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSD	EEEEEEEE---SS--HHHHHHHHHHHHHHHHHHHHH	xxxxbwxxpaxeaxxaaaaaaaaaaaaaaaaaaaaa
1f2j_A_193	1f2j	A	193	228	VPIVEPEVMIDGTHDIETCQRVSQHVWSEVVSALHR	EEEEEEEE---SS--HHHHHHHHHHHHHHHHHHHHH	xxxxbwxxxapeaxbaaaaaaaaaaaaaaaaaaaaa
1fba_A_183	1fba	A	183	218	VPIVEPEVLPDGDHDLDRAQKVTETVLAAVYKALSD	EEEEEEEE---SS--HHHHHHHHHHHHHHHHHHHHH	xxxxbwxxxapeaxxaaaaaaaaaaaaaaaaaaaaa
1fdj_A_1183	1fdj	A	1183	1218	VPIVEPEVIPDGDHDLEHCQYVTEKVLAAVYKALND	EEEEEEEE---SS--HHHHHHHHHHHHHHHHHHHHH	xxxxbwxxxapeaxxaaaaaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ado_A_183	1ado	A	13P1,3-DIHYDROXYACETONEPHOSPHATE	E - 187
1ado_A_183	1ado	A	13P1,3-DIHYDROXYACETONEPHOSPHATE	E - 189
1fdj_A_1183	1fdj	A	2FP1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM)	E - 1187
1fdj_A_1183	1fdj	A	2FP1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM)	E - 1189

Clusters included in this Subclass