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Information on SUBCLASS 8.8.1
Subclass Accession number: 7614
Subclass: 8.8.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 51.7 +/- 19.1
Average RMSD (Å) : 0.250 +/- 0.058

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: WNGPhGVFEhXX
(φψ)-conformation: bbepabpaabaa
Pattern: x[AIV][IV][W][N][G][P][MP][G][V][F][E][FIM]xx[FY][AS]x[G][T][FK][AQ][ILV][AL]x[AE][ILMV][AGV][AEKR]
Conservation:-0.839-0.5800.0773.0541.0581.0581.457-0.5231.0580.2601.0580.659-0.550-0.872-1.1370.559-0.290-0.9871.0580.659-0.757-0.585-0.232-0.657-1.187-0.606-0.413-0.939-0.862
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
13pk_A_33413pk   A334362SAIWNGPMGVFEMVPYSKGTFAIAKAMGREEEEES-SS-TTSGGG-HHHHHHHHHHHHbbbbbepabxaabaaaaaaaaaaaaaaaa
1php_*_3121php   -312340LVVWNGPMGVFEMDAFAHGTKAIAEALAEEEEEES-SS-TTSGGG-HHHHHHHHHHHHbbbbbepabxaabaaaaaaaaaaaaaaaa
1qpg_*_3301qpg   -330358TIVWNGPPGVFEFEKFAAGTKALLDEVVKEEEEES-SS-TTSGGG-HHHHHHHHHHHHbbbbbexabxaabaaaaaaaaaaaaaaaa
1vpe_*_3131vpe   -313341TVVWNGPMGVFEIDDFAEGTKQVALAIAAEEEEES-SS-TTSGGG-HHHHHHHHHHHHbbbbbexabxaaxaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
13pk_A_33413pk   A     ADPADENOSINE-5'-DIPHOSPHATE N - 338
13pk_A_33413pk   A     ADPADENOSINE-5'-DIPHOSPHATE G - 339
13pk_A_33413pk   A     ADPADENOSINE-5'-DIPHOSPHATE P - 340
13pk_A_33413pk   A     ADPADENOSINE-5'-DIPHOSPHATE M - 341
13pk_A_33413pk   A     ADPADENOSINE-5'-DIPHOSPHATE G - 342
13pk_A_33413pk   A     ADPADENOSINE-5'-DIPHOSPHATE V - 343
13pk_A_33413pk   A     ADPADENOSINE-5'-DIPHOSPHATE F - 344
13pk_A_33413pk   A     PO4PHOSPHATE ION F - 344
13pk_A_33413pk   A     ADPADENOSINE-5'-DIPHOSPHATE E - 345
13pk_A_33413pk   A     PO4PHOSPHATE ION E - 345
13pk_A_33413pk   A     PO4PHOSPHATE ION M - 346
13pk_A_33413pk   A     PO4PHOSPHATE ION V - 347
13pk_A_33413pk   A     PO4PHOSPHATE ION S - 350
13pk_A_33413pk   A     PO4PHOSPHATE ION F - 354
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE N - 316
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE G - 317
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE P - 318
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE M - 319
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE G - 320
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE V - 321
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE F - 322
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE E - 323
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE N - 334
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 335
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE P - 336
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE P - 337
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 338
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE V - 339
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE F - 340
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE E - 341
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER N - 317
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 318
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER P - 319
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER M - 320
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 321
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER V - 322
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER F - 323
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER E - 324

Clusters included in this Subclass
CLUSTER: EH.11.13