Information on SUBCLASS 6.2.2 |
Subclass Accession number: 765
Subclass: 6.2.2 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0003677 (>75 %) GO:0003700 (>75 %) GO:0003723 (>75 %) SCOP : 50036 (>75 %) 63748 (>75 %) 89299 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 63.5 +/- -12.2 Average RMSD (Å) : 0.233 +/- 0.058 Consensus geometry
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Consensus Sequence: | AhDpXNPXLh |
(φψ)-conformation: | bppaabaabb |
Pattern: | [K] | [L] | [E] | [A] | [IV] | [D] | [KR] | [KMR] | [N] | [P] | x | [L] | [IV] | [CR] | [PV] | [A] | [ST] | [IV] | [EGT] | [D] | [V] |
Conservation: | 0.721 | 0.133 | 0.721 | 0.133 | -0.158 | 1.309 | -0.151 | -1.239 | 1.309 | 1.897 | -1.631 | 0.133 | -0.151 | -0.732 | -1.260 | 0.133 | -0.622 | -0.158 | -1.827 | 1.309 | 0.133 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1oi1_A_177 | 1oi1 | A | 177 | 197 | KLEAIDKKNPYLICPATIGDV | EEEEE-TTSTT-EEEEEEEEE | bbbbxxaabaabbbwbbxabb |
1oz2_A_350 | 1oz2 | A | 350 | 370 | KLEAVDRMNPSLVCVASVTDV | EEEEE-TTSTT-EEEEEEEEE | bbbbxxaabaabbbxbbxabb |
1oz2_A_454 | 1oz2 | A | 454 | 474 | KLEAVDRRNPALIRVASVEDV | EEEEE-SSSTT-EEEEEEEEE | bbbbxxaabaaxbbxbbxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1oz2_A_454 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | D - 459 |
1oz2_A_454 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | R - 460 |
1oz2_A_454 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | R - 461 |
1oz2_A_454 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | N - 462 |
1oz2_A_454 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | R - 467 |
1oz2_A_454 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | E - 472 |
1oz2_A_454 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | D - 473 |
Clusters included in this Subclass |
CLUSTER: HA.6.94 |