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Information on SUBCLASS 6.4.1
Subclass Accession number: 768
Subclass: 6.4.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  1.1 (>75 %)  1.1.99 (>75 %)  1.1.99.8
GO : GO:0005509 (>50 %)  GO:0016614 (>75 %)  GO:0018468 (>75 %)  
SCOP : 50997 (>50 %)  50998 (>50 %)  50999 (>50 %)  
 Number of loops: 23

Average sequence ID (%) : 10.8 +/- 12.4
Average RMSD (Å) : 0.613 +/- 0.285

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXXXpXXXX
(φψ)-conformation: bbpplbapbb
Pattern: xxxx[ailp][gnqrst][dgknrst][adegknqrst]xxxx
Conservation:-0.923-0.901-0.231-0.3431.1942.0001.1560.388-0.698-0.8020.200-1.040
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8y_*_1951a8y   -196207DFYEAFMEEPVTEEE-TT-SSEEExbbxxvbaxxxb
1dpe_*_371dpe   -3748VEFKIGTTEVIPEEE-TTSS-EEEbbxppvbaxbbp
1e1a_A_2701e1a   A273284LHFKPQTKTIFVEEE-TTSSEEEEbbxxpvbaxbxb
1e42_A_8981e42   A903914LRIQPGNPNYTLEEE-TT-S-EEEbbbbxvbabxxb
1g0u_C_1341g0u   C139150AGFDPRDDEPKLEEE-TT--SEEEbebpxvbaxxbb
1g9o_A_261g9o   A2839LHGEKGKLGQYIEEE-TT-SSEEEbbxbpvbaxbbx
1hbn_A_711hbn   A7182PYQVSTTDTYVEEEEBTTSS-EEExbxxxvbaxbbx
1hqz_1_651hqz   17081RVSPPGSDVEKIEE--TT-S--EEbbbxxgbaxbbb
1i52_A_1411i52   A142153KRAEPGKNAIAHEEE-TTSSSEEEbbxxpvbabxab
1k4i_A_1801k4i   A180189.QEVEGRAVRA..EE-TTSS-EE..bxbpvbabbx.
1knz_A_1251knz   A126137VKRIPGKSSSIIEE--TT-SS-EEbbbxpgxaxbbb
1krh_A_1441krh   A146157NVTLPGTTETRSEEE-TTSS-EEExxxxpvbaxbbx
1lf2_A_2361lf2   A236247VIKVPFLPFYVTEEE-SSS--EEEbbxxpgxaxbbb
1lqa_A_31lqa   A314YHRIPHSSLEVSEEE-TTSS-EEEbbxxpvbaxbxx
1m6k_A_2081m6k   A215226AGFTANRTLQNGEEE-TTSS-EEEbbxxpvbaxbbb
1ny5_A_2591ny5   A259270KFYRLGGRKEIEEE--BT--S-EEbbbxxvbaxpbb
1pin_A_111pin   A1324KRMSRSSGRVYYEEE-TTS--EEExbbxxvbaxxbb
1qwy_A_2421qwy   A246257TIKEANSNNYQWEEEETTSSEEEEbbxxplbabbbb
1qwz_A_711qwz   A7485WIKLSGTSLNYPEEE-TTSS-EEEbbbbpvbaxbbx
1qxm_A_1631qxm   A164175LSKNLNSQIIVLEEE-TTSSBEEExbxxxlbaxxbx
1szw_A_2241szw   A224235ALQLAGRGSWFVEEE-TTSS-EEEbbbxpvbaxbbb
1ute_A_1181ute   A121132RFKIPRSNVSVAEEE-TTSS-EEEbbbpwlbaxbbb
1uwv_A_1481uwv   A148157.FRKAGSSDIV..EEBTTSS-EE..bxxxvbaxxx.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dpe_*_371dpe   *     CDCADMIUM ION E - 45
1e1a_A_2701e1a   A     CACALCIUM ION S - 271
1e1a_A_2701e1a   A     CACALCIUM ION N - 272
1e1a_A_2701e1a   A     CACALCIUM ION L - 273
1e1a_A_2701e1a   A     CACALCIUM ION H - 274
1e1a_A_2701e1a   A     CACALCIUM ION F - 275
1hbn_A_711hbn   A     MGN2-METHYL-GLUTAMINE Y - 72
1hbn_A_711hbn   A     MGMAGNESIUM ION Y - 72
1krh_A_1441krh   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 144
1krh_A_1441krh   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 149
1krh_A_1441krh   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 156
1krh_A_1441krh   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 157
1krh_A_1441krh   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 158
1krh_A_1441krh   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 159
1m6k_A_2081m6k   A     KCXLYSINE NZ-CARBOXYLIC ACID K - 212
1m6k_A_2081m6k   A     MPD2-METHYL-2,4-PENTANEDIOL T - 213
1m6k_A_2081m6k   A     MPD2-METHYL-2,4-PENTANEDIOL G - 214
1m6k_A_2081m6k   A     MPD2-METHYL-2,4-PENTANEDIOL A - 215
1m6k_A_2081m6k   A     MPD2-METHYL-2,4-PENTANEDIOL G - 216
1ny5_A_2591ny5   A     PO4PHOSPHATE ION K - 259
1ny5_A_2591ny5   A     PO4PHOSPHATE ION F - 260
1ny5_A_2591ny5   A     PO4PHOSPHATE ION Y - 261
1ny5_A_2591ny5   A     PO4PHOSPHATE ION R - 262
1ny5_A_2591ny5   A     GOLGLYCEROL R - 266
1ny5_A_2591ny5   A     GOLGLYCEROL K - 267
1ny5_A_2591ny5   A     PO4PHOSPHATE ION I - 269
1pin_A_111pin   A     1PG2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL S - 16
1pin_A_111pin   A     1PG2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL Y - 23
1pin_A_111pin   A     1PG2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL Y - 24
1qwy_A_2421qwy   A     ZNZINC ION H - 260
1szw_A_2241szw   A     MSESELENOMETHIONINE A - 224
1szw_A_2241szw   A     MSESELENOMETHIONINE L - 225
1szw_A_2241szw   A     MSESELENOMETHIONINE Q - 226
1szw_A_2241szw   A     MSESELENOMETHIONINE L - 227
1szw_A_2241szw   A     MSESELENOMETHIONINE A - 228
1szw_A_2241szw   A     MSESELENOMETHIONINE G - 229
1uwv_A_1481uwv   A     MSESELENOMETHIONINE F - 148
1uwv_A_1481uwv   A     FS4IRON/SULFUR CLUSTER F - 148
1uwv_A_1481uwv   A     MSESELENOMETHIONINE I - 156
1uwv_A_1481uwv   A     MSESELENOMETHIONINE V - 157
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e1a_A_2701e1a   A DFPDFP BINDING SITES - 271
1e1a_A_2701e1a   A AC2CA BINDING SITE FOR CHAIN AL - 273
1e1a_A_2701e1a   A AC2CA BINDING SITE FOR CHAIN AH - 274

Clusters included in this Subclass
CLUSTER: HA.5.29
CLUSTER: HA.6.19
CLUSTER: HA.7.6
CLUSTER: HA.7.61