Information on SUBCLASS 13.3.1 |
Subclass Accession number: 7687
Subclass: 13.3.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 50.0 +/- 22.6 Average RMSD (Å) : 0.525 +/- 0.189 Consensus geometry
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Consensus Sequence: | VhVGVhhpXpXhXXpPh |
(φψ)-conformation: | bpappwpplpbpbbpaa |
Pattern: | [TV] | [S] | [V] | [IV] | [TV] | [G] | [V] | [AP] | [AP] | [DS] | [AGS] | [EKQ] | [en] | [IL] | [AST] | [imt] | [DNR] | [P] | [FM] | x | [L] | [FLV] |
Conservation: | -0.425 | 0.732 | 0.732 | 0.416 | -0.345 | 2.034 | 0.732 | -0.088 | -0.088 | -0.308 | -0.718 | -0.199 | -1.262 | 0.113 | -0.633 | -1.424 | -0.744 | 2.685 | -0.066 | -1.027 | 0.732 | -0.850 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d1t_A_288 | 1d1t | A | 288 | 309 | TSVVVGVPPSAKMLTYDPMLLF | EEEE-S---TT------THHHH | bbxxaxxwwplbxbbbxaaaaa |
1ht0_A_288 | 1ht0 | A | 288 | 309 | TSVIVGVPPDSQNLSINPMLLL | EEEE-S---TT------THHHH | bbbxaxxxxplbbbbbxaaaaa |
1m6h_A_287 | 1m6h | A | 287 | 308 | VSVVVGVAASGEEIATRPFQLV | EEEE-S---TT------THHHH | bbbxaxbxxpgxbxbbxaaaaa |
1n8k_A_288 | 1n8k | A | 288 | 309 | VSVITGVPPDSQNLSMNPMLLL | EEEE-S---TT------THHHH | bbbxaxxwxpvxbxbbxwaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d1t_A_288 | 1d1t | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 291 |
1d1t_A_288 | 1d1t | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 292 |
1d1t_A_288 | 1d1t | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 293 |
1d1t_A_288 | 1d1t | A | ACTACETATE ION | V - 294 |
1d1t_A_288 | 1d1t | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 294 |
1d1t_A_288 | 1d1t | A | ACTACETATE ION | F - 309 |
1d1t_A_288 | 1d1t | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | F - 309 |
1ht0_A_288 | 1ht0 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 291 |
1ht0_A_288 | 1ht0 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | L - 309 |
1m6h_A_287 | 1m6h | A | PO4PHOSPHATE ION | V - 287 |
1n8k_A_288 | 1n8k | A | NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) | I - 291 |
1n8k_A_288 | 1n8k | A | NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) | T - 292 |
1n8k_A_288 | 1n8k | A | NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) | G - 293 |
1n8k_A_288 | 1n8k | A | NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) | V - 294 |
1n8k_A_288 | 1n8k | A | PZOPYRAZOLE | V - 294 |
1n8k_A_288 | 1n8k | A | NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) | L - 309 |
Clusters included in this Subclass |
CLUSTER: EH.13.11 |