Information on SUBCLASS 6.5.1 |
Subclass Accession number: 769
Subclass: 6.5.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.4.21 (>75 %) GO : GO:0004252 (>75 %) GO:0005509 (>75 %) GO:0008236 (>75 %) SCOP : 57439 (>75 %) 57440 (>75 %) 57441 (>75 %) |
Number of loops: 21 Average sequence ID (%) : 21.7 +/- 22.2 Average RMSD (Å) : 0.505 +/- 0.156 Consensus geometry
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Consensus Sequence: | XXXXXXXGXh |
(φψ)-conformation: | bppaabpgbb |
Pattern: | x | [adepqs] | x | [dekpqrst] | x | x | [dkpqs] | [AGN] | x | [cfilmvwy] | x |
Conservation: | -0.301 | 0.054 | -0.521 | 0.024 | -0.321 | -0.512 | 0.712 | 2.738 | -0.818 | -0.381 | -0.672 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1amu_A_396 | 1amu | A | 398 | 408 | VDNPFVPGEKL | EE-SSSTTSEE | xxxaabpgxbb |
1aya_A_28 | 1aya | A | 32 | 42 | RPSKSNPGDFT | EE-SSSTT-EE | bpxaabpgbbb |
1c0a_A_177 | 1c0a | A | 178 | 188 | VPSRVHKGKFY | EE-SSSTT-EE | bxxaabpvbbx |
1d4t_A_28 | 1d4t | A | 32 | 42 | RDSESVPGVYC | EE-SSSTT-EE | bxxaabpvbbb |
1dx5_I_398 | 1dx5 | I | 398 | 408 | DCDPNTQASCE | EE-TTSTT-EE | xbxaabpvbbb |
1f5n_A_78 | 1f5n | A | 83 | 93 | VPHPKKPGHIL | EE-SSSTT-EE | bxxaabpvbbx |
1fmk_*_171 | 1fmk | - | 175 | 185 | RESETTKGAYC | EE-SSSTT-EE | bxxaabxgxbb |
1gzg_A_51 | 1gzg | A | 52 | 62 | ESIPSMPGVER | EE-TTSTT-EE | bxbaabpvbbx |
1hpi_*_48 | 1hpi | - | 49 | 59 | GPCSVFPGKLV | EEBTTSTTEEE | bxbaabpvbbb |
1i3z_A_27 | 1i3z | A | 31 | 41 | RDSESVPGALC | EE-SSSTT-EE | bxxaabxgxbb |
1jlx_A_45 | 1jlx | A | 48 | 58 | EPSKTYDGLVH | EE-SSSTT-EE | bpxaabpvxbb |
1jyr_A_83 | 1jyr | A | 86 | 96 | RESESAPGDFS | EE-SSSTT-EE | bxxaabpvbbb |
1k9a_A_103 | 1k9a | A | 107 | 117 | RESTNYPGDYT | EE-SSSTTSEE | bxbaabpgbbb |
1khb_A_67 | 1khb | A | 67 | 77 | RRLKKYDNCWL | EE-TTSBS-EE | bxbaabxlbbb |
1l0w_A_183 | 1l0w | A | 184 | 194 | VPYRHEPGLFY | EE-TTSTT-EE | bpxaabpvbbb |
1l6s_A_44 | 1l6s | A | 44 | 54 | KAVEAMPGVMR | EE-TTSTT-EE | bxxaabpgxbx |
1lkk_A_151 | 1lkk | A | 154 | 164 | RESESTAGSFS | EE-SSSTT-EE | bpxaabpvbbb |
1m61_A_34 | 1m61 | A | 37 | 47 | RQCLRSLGGYV | EE-SSBTT-EE | bxxaaxpvxbb |
1ohl_A_54 | 1ohl | A | 55 | 65 | TEIDSLPNINR | EE-TTSTT-EE | xxxaabpvbbb |
2shp_A_134 | 2shp | A | 138 | 148 | RESQSHPGDFV | EE-SSSTT-EE | bxxaaxxgxbb |
3tgl_*_96 | 3tgl | - | 97 | 107 | VSYPPVSGTKV | EE-TTSTT-EE | bxxaabxvbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.6.9 |
CLUSTER: HA.8.0 |