Information on SUBCLASS 4.4.1 |
Subclass Accession number: 77
Subclass: 4.4.1 Type: HA beta-beta hairpin DB: ArchDB-KI |
Number of loops: 5 Average sequence ID (%) : 76.2 +/- 4.8 Average RMSD (Å) : 0.35 +/- 0.09 Consensus geometry
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Consensus Sequence: | YVDDGLIS |
(φψ)-conformation: | bblllabb |
Pattern: | [KT] | [V] | [LY] | [V] | [D] | [D] | [G] | [L] | [I] | x | [LM] | x | [V] | [KT] | x | x |
Conservation: | -0.767 | 0.389 | -0.568 | 0.389 | 1.552 | 1.552 | 1.552 | 0.389 | 0.389 | -0.513 | -0.062 | -1.419 | 0.389 | -0.767 | -1.032 | -1.474 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a49_A_172 | 1a49 | A | 172 | 187 | KVYVDDGLISLQVKQK | EEEETTTTEEEEEEEE | bbbbvlvabbbbpabb |
1aqf_A_172 | 1aqf | A | 172 | 187 | KVYVDDGLISLQVKQK | EEEETTTTEEEEEEEE | bbbbllvaxbbbxabb |
1pkm_*_172 | 1pkm | - | 172 | 187 | KVYVDDGLISLLVKEK | EEEETTTTEEEEEEEE | bbbbllUabbbxxabb |
1pkn_*_172 | 1pkn | - | 172 | 187 | KVYVDDGLISLQVKQK | EEEETTTTEEEEEEEE | xbbbllUabxbxxabb |
1pky_A_122 | 1pky | A | 122 | 137 | TVLVDDGLIGMEVTAI | EEEETTTTEEEEEEEE | bbbbvlvabbbxxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a49_A_172 | 1a49 | A | ATPADENOSINE-5'-TRIPHOSPHATE | D - 176 |
1a49_A_172 | 1a49 | A | OXLOXALATE ION | D - 177 |
1a49_A_172 | 1a49 | A | MGMAGNESIUM ION | D - 177 |
1a49_A_172 | 1a49 | A | ATPADENOSINE-5'-TRIPHOSPHATE | D - 177 |
1aqf_A_172 | 1aqf | A | PEQL-PHOSPHOLACTATE | D - 177 |
Clusters included in this Subclass |
CLUSTER: HA.3.5 |