Information on SUBCLASS 6.8.1 |
Subclass Accession number: 772
Subclass: 6.8.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>75 %) 3.1.1 (>75 %) 3.1.1.34.1 (>50 %) GO : GO:0016298 (>75 %) GO:0016788 (>75 %) GO:0016789 (>75 %) GO:0016829 (>50 %) GO:0016830 (>50 %) SCOP : 50997 (>75 %) 53473 (>75 %) 53474 (>75 %) 53577 (>75 %) |
Number of loops: 9 Average sequence ID (%) : 7.5 +/- 11.0 Average RMSD (Å) : 0.922 +/- 0.179 Consensus geometry
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Consensus Sequence: | ppppXppXXX |
(φψ)-conformation: | bbaabappbb |
Pattern: | x | x | [ailmy] | [kqrt] | [cdeqst] | x | [ADEKNRS] | x | [adkqst] | [eknst] | x | x | x |
Conservation: | 0.385 | -0.841 | -0.394 | 0.439 | -0.018 | 0.174 | 1.729 | -1.183 | 0.750 | 1.643 | -1.568 | -0.423 | -0.692 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1axi_B_172 | 1axi | B | 176 | 188 | LQYKEVNETKWKM | EEEEETT-SS-EE | xbbbxaaxaxbxb |
1bqu_A_137 | 1bqu | A | 141 | 153 | IQYRTKDASTWSQ | EEEEETT-SS-EE | bbbbxaaxaxbbb |
1ebf_A_319 | 1ebf | A | 321 | 333 | ISIKTKRYTNPVV | EEEEESS-SS-EE | bbbbbaaxaxxxb |
1f00_I_732 | 1f00 | I | 732 | 744 | VSARVSDVAVDVK | EEEEETT----EE | xbbbxaababxbx |
1ihp_*_383 | 1ihp | - | 387 | 399 | EMMQCQAEQEPLV | EEEEESS-SS-EE | bbbbbaaxaxxbb |
1iqa_A_240 | 1iqa | A | 241 | 253 | VVKTSIKIPSSHN | EEEEESSS---EE | xbbbbaaxapbbx |
1nuy_A_1091 | 1nuy | A | 1092 | 1104 | CVLVSEEDKNAII | EEEEETT-SS-EE | abbbbaababxxx |
1orv_A_382 | 1orv | A | 384 | 396 | ICHFQTDKSNCTF | EEEEETT-S-EEE | xbxbxaabaxbbx |
3lkf_A_32 | 3lkf | A | 39 | 51 | NFIKDKSYDKDTL | EEEEETTSSSEEE | bxbxbaababxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1iqa_A_240 | 1iqa | A | MSESELENOMETHIONINE | Y - 240 |
1iqa_A_240 | 1iqa | A | MSESELENOMETHIONINE | V - 241 |
1iqa_A_240 | 1iqa | A | MSESELENOMETHIONINE | V - 242 |
1iqa_A_240 | 1iqa | A | MSESELENOMETHIONINE | N - 253 |
1nuy_A_1091 | 1nuy | A | F6PFRUCTOSE-6-PHOSPHATE | E - 1097 |
1nuy_A_1091 | 1nuy | A | MGMAGNESIUM ION | E - 1097 |
1nuy_A_1091 | 1nuy | A | PIHYDROGENPHOSPHATE ION | E - 1097 |
1nuy_A_1091 | 1nuy | A | MGMAGNESIUM ION | E - 1098 |
1nuy_A_1091 | 1nuy | A | PIHYDROGENPHOSPHATE ION | E - 1098 |
Clusters included in this Subclass |
CLUSTER: HA.5.77 |
CLUSTER: HA.7.13 |