Information on SUBCLASS 2.1.4 |
Subclass Accession number: 7729
Subclass: 2.1.4 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 26.0 +/- 22.1 Average RMSD (Å) : 0.380 +/- 0.092 Consensus geometry
|
Consensus Sequence: | XhcGpX |
(φψ)-conformation: | bblgbb |
Pattern: | [filvwy] | x | [imvy] | [ADKN] | [GR] | [EGKRT] | x |
Conservation: | -0.462 | -0.869 | 0.026 | 0.764 | 1.817 | -0.233 | -1.044 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1abr_B_62 | 1abr | B | 62 | 68 | IRSNGKC | EEETTEE | bbbvgpx |
1dc1_A_184 | 1dc1 | A | 189 | 195 | WTINGKH | EEETTEE | bbblgxx |
1gsa_*_43 | 1gsa | - | 44 | 50 | YLINGEA | EEETTEE | bbblvxx |
1hp1_A_474 | 1hp1 | A | 478 | 484 | LKIKGEP | EEETTEE | xbblvbx |
1j54_A_30 | 1j54 | A | 37 | 43 | EVVNRRL | EEETTEE | xbbllbx |
1k2y_X_114 | 1k2y | X | 119 | 125 | IVVAGET | EEETTEE | bbblvbx |
1obb_A_204 | 1obb | A | 210 | 216 | FRYNGGN | EEETTEE | bbbvvbx |
1sox_A_269 | 1sox | A | 272 | 278 | YEMNGTE | EEETTEE | abblvbx |
2bat_*_231 | 2bat | - | 231 | 237 | VCINGTC | EEETTEE | bbbUgbb |
4pep_*_191 | 4pep | - | 197 | 203 | ITMDGET | EEETTEE | bbblUbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dc1_A_184 | 1dc1 | A | DIO1,4-DIETHYLENE DIOXIDE | A - 184 |
1dc1_A_184 | 1dc1 | A | DIO1,4-DIETHYLENE DIOXIDE | K - 185 |
1j54_A_30 | 1j54 | A | TMPTHYMIDINE-5'-PHOSPHATE | I - 31 |
1j54_A_30 | 1j54 | A | EGLETHYLENE GLYCOL | V - 38 |
1j54_A_30 | 1j54 | A | EGLETHYLENE GLYCOL | V - 39 |
1j54_A_30 | 1j54 | A | EGLETHYLENE GLYCOL | N - 40 |
1k2y_X_114 | 1k2y | X | ZNZINC ION | K - 118 |
1k2y_X_114 | 1k2y | X | TLAL(+)-TARTARIC ACID | K - 118 |
1obb_A_204 | 1obb | A | CSWCYSTEINE-S-DIOXIDE | I - 205 |
1sox_A_269 | 1sox | A | MTEPHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7, 8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER | M - 274 |
2bat_*_231 | 2bat | * | NAGN-ACETYL-D-GLUCOSAMINE | I - 233 |
2bat_*_231 | 2bat | * | NAGN-ACETYL-D-GLUCOSAMINE | N - 234 |
Clusters included in this Subclass |
CLUSTER: HA.2.22 |