Information on SUBCLASS 2.2.5 |
Subclass Accession number: 7739
Subclass: 2.2.5 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 20 Average sequence ID (%) : 9.2 +/- 12.9 Average RMSD (Å) : 0.385 +/- 0.142 Consensus geometry
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Consensus Sequence: | XpppXX |
(φψ)-conformation: | bbaabb |
Pattern: | [afgikltv] | x | x | [ADEGNQST] | [deknprs] | [dehknrsty] | x | x | [afiklmv] |
Conservation: | 0.037 | -0.816 | -1.262 | 1.173 | 1.711 | 0.521 | -0.916 | -0.560 | 0.113 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1blx_A_79 | 1blx | A | 85 | 93 | VSRTDRETK | EEE-SSEEE | abbbaabbb |
1bpy_A_224 | 1bpy | A | 228 | 236 | LSKGETKFM | EEE-SSEEE | abbbaabbb |
1c8u_A_74 | 1c8u | A | 81 | 89 | LRDGNSFSA | EEE-SSEEE | abbbaabbb |
1ciu_*_537 | 1ciu | - | 539 | 547 | VSWDDTEVK | EEE-SSEEE | abbbaabbb |
1d3c_A_541 | 1d3c | A | 542 | 550 | TSWEDTQIK | EEE-SSEEE | abbbaabbb |
1f1s_A_913 | 1f1s | A | 916 | 924 | LENSSKQQV | EEE-SSEEE | abbbaabbb |
1fy7_A_226 | 1fy7 | A | 228 | 236 | IYRDDYVSF | EEE-SSEEE | abbbaabbb |
1gup_A_212 | 1gup | A | 213 | 221 | VVETEHWLA | EEE-SSEEE | abbbaabbb |
1gx3_A_209 | 1gx3 | A | 211 | 219 | AVVTDDARY | EEE-SSEEE | bbbxaabbb |
1hr6_B_98 | 1hr6 | B | 101 | 109 | AYTSRENTV | EEE-SSEEE | bbbbaabbb |
1ixm_A_175 | 1ixm | A | 178 | 186 | FEITSHECL | EEE-SSEEE | bbxbaabbb |
1k4f_A_193 | 1k4f | A | 194 | 202 | TEAAPEYLV | EEE-SSEEE | abbbaabbb |
1lwj_A_393 | 1lwj | A | 397 | 405 | LCKEDKFLV | EEE-SSEEE | abbxaabbb |
1mbm_A_100 | 1mbm | A | 104 | 112 | GLLSGEVCL | EEE-SS-EE | bxbbaabbb |
1o9l_A_468 | 1o9l | A | 468 | 476 | RIITEKAVF | EEE-SSEEE | bbbbaabbb |
1obd_A_14 | 1obd | A | 15 | 23 | VARGKVRDI | EEE-SSEEE | abbxaabbb |
1ovm_A_304 | 1ovm | A | 305 | 313 | IEVQPHAAR | EEE-SSEEE | bbbbaabbb |
1prz_A_86 | 1prz | A | 87 | 95 | VYEDEDIIV | EEE-SSEEE | abbbaabbb |
1qho_A_409 | 1qho | A | 413 | 421 | RWINNDVYI | EEE-SSEEE | abbbaabbb |
1qho_A_538 | 1qho | A | 539 | 547 | KSWTSNRIE | EEE-SSEEE | abbbaabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1obd_A_14 | 1obd | A | AC2ATP BINDING SITE FOR CHAIN A | G - 18 |
1obd_A_14 | 1obd | A | AC2ATP BINDING SITE FOR CHAIN A | K - 19 |
1obd_A_14 | 1obd | A | AC2ATP BINDING SITE FOR CHAIN A | R - 21 |
Clusters included in this Subclass |
CLUSTER: HA.2.13 |
CLUSTER: HA.4.17 |