Information on SUBCLASS 2.2.6 |
Subclass Accession number: 7740
Subclass: 2.2.6 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 13 Average sequence ID (%) : 44.4 +/- 32.1 Average RMSD (Å) : 0.246 +/- 0.097 Consensus geometry
|
Consensus Sequence: | hXXpXh |
(φψ)-conformation: | abaabb |
Pattern: | [ACLY] | [eg] | [agi] | x | [lp] | [ITV] | [agnrs] | [DEPS] | [DENQRSY] | [FTW] | [FLV] | [FLV] | [stw] |
Conservation: | 0.491 | 0.496 | -0.431 | -1.841 | -0.902 | 1.505 | -0.980 | 0.470 | -0.898 | 1.298 | 0.705 | 0.629 | -0.541 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aut_C_40 | 1aut | C | 42 | 54 | CGAVLIHPSWVLT | EEEEEEETTEEEE | bbbbxabaabbbb |
1bio_*_39 | 1bio | - | 42 | 54 | CGGVLVAEQWVLS | EEEEEEETTEEEE | bxbbxabaabbxb |
1cgh_A_41 | 1cgh | A | 42 | 54 | CGGFLVREDFVLT | EEEEEEETTEEEE | bbbbxabaabbbb |
1ddj_A_586 | 1ddj | A | 588 | 600 | CGGTLISPEWVLT | EEEEEEETTEEEE | bbbbxabaabbbb |
1elv_A_444 | 1elv | A | 445 | 457 | AGGALINEYWVLT | EEEEEEETTEEEE | bbbbxabaabbxb |
1f7z_A_40 | 1f7z | A | 42 | 54 | CGGSLINDQWVVS | EEEEEEETTEEEE | bbbbxabaabbbb |
1fuj_A_42 | 1fuj | A | 42 | 54 | CGGTLIHPSFVLT | EEEEEEETTEEEE | bbbbxabaabbbb |
1h4w_A_40 | 1h4w | A | 42 | 54 | CGGSLISEQWVVS | EEEEEEETTEEEE | bbbbxabaabbbb |
1hj8_A_40 | 1hj8 | A | 42 | 54 | CGGSLVNENWVVS | EEEEEEETTEEEE | bxbbxabaabbbb |
1hj9_A_40 | 1hj9 | A | 42 | 54 | CGGSLINSQWVVS | EEEEEEETTEEEE | bxbbxabaabbxb |
1hs6_A_209 | 1hs6 | A | 209 | 221 | LESRQIGPRTLVW | EEEEEEETTEEEE | xbbbxabaabbbb |
1trn_A_40 | 1trn | A | 42 | 54 | CGGSLINEQWVVS | EEEEEEETTEEEE | bxbbxabaabbxb |
2bbk_H_168 | 2bbk | H | 169 | 181 | YHIFPTAPDTFFM | EEEEEEETTEEEE | bebbwabaabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aut_C_40 | 1aut | C | MAIDEOXO-METHYLARGININE | A - 41 |
1aut_C_40 | 1aut | C | MAIDEOXO-METHYLARGININE | C - 42 |
1bio_*_39 | 1bio | * | SOAISATOIC ANHYDRIDE | C - 42 |
1cgh_A_41 | 1cgh | A | PPHPHENYLALANINE PHOSPHINIC ACID | R - 41 |
1cgh_A_41 | 1cgh | A | PPHPHENYLALANINE PHOSPHINIC ACID | C - 42 |
1cgh_A_41 | 1cgh | A | PPHPHENYLALANINE PHOSPHINIC ACID | G - 43 |
1trn_A_40 | 1trn | A | ISPPHOSPHORYLISOPROPANE | F - 41 |
1trn_A_40 | 1trn | A | ISPPHOSPHORYLISOPROPANE | C - 42 |
Clusters included in this Subclass |
CLUSTER: HA.2.20 |
CLUSTER: HA.3.25 |