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Information on SUBCLASS 2.2.9
Subclass Accession number: 7743
Subclass: 2.2.9 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 23.8 +/- 19.6
Average RMSD (Å) : 0.438 +/- 0.200

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XpXpGX
(φψ)-conformation: bbaaeb
Pattern: [aegn][DGNST]x[aegqst][G]x
Conservation:-0.3890.022-0.633-0.3941.986-0.592
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1deu_A_691deu   A6974GSCEGGEETBEEebaaeb
1ev2_E_2271ev2   E234239ENEYGSEETTEEbbaaeb
1f52_A_1371f52   A142147ASISGSEETTEEbbaaeb
1fmt_A_2641fmt   A267272ANKQGIEETTEEbbaaeb
1jae_*_681jae   -6873NTRSGDEETTEEbbaaex
1kzk_A_431kzk   A4853GGIGGFEETTEEbbaaex
1rvv_1_1281rvv   1129134GTKAGNEETTEEgbaaeb
4ubp_C_694ubp   C7782LDYTGIEETTEEbbaaeb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kzk_A_431kzk   A     EGLETHYLENE GLYCOL K - 43
1kzk_A_431kzk   A     EGLETHYLENE GLYCOL P - 44
1kzk_A_431kzk   A     JE2(R)-N-(2-METHYLBENZYL)-3-[(2S,3S)-2-HYDROXY-3-(3-HYDROXY-2-METHYLBENZOYL)AMINO-4-PHENYLBUTANOYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXAMIDE K - 45
1kzk_A_431kzk   A     JE2(R)-N-(2-METHYLBENZYL)-3-[(2S,3S)-2-HYDROXY-3-(3-HYDROXY-2-METHYLBENZOYL)AMINO-4-PHENYLBUTANOYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXAMIDE I - 47
1kzk_A_431kzk   A     JE2(R)-N-(2-METHYLBENZYL)-3-[(2S,3S)-2-HYDROXY-3-(3-HYDROXY-2-METHYLBENZOYL)AMINO-4-PHENYLBUTANOYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXAMIDE G - 48
1kzk_A_431kzk   A     JE2(R)-N-(2-METHYLBENZYL)-3-[(2S,3S)-2-HYDROXY-3-(3-HYDROXY-2-METHYLBENZOYL)AMINO-4-PHENYLBUTANOYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXAMIDE G - 49
1kzk_A_431kzk   A     JE2(R)-N-(2-METHYLBENZYL)-3-[(2S,3S)-2-HYDROXY-3-(3-HYDROXY-2-METHYLBENZOYL)AMINO-4-PHENYLBUTANOYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXAMIDE I - 50
1kzk_A_431kzk   A     JE2(R)-N-(2-METHYLBENZYL)-3-[(2S,3S)-2-HYDROXY-3-(3-HYDROXY-2-METHYLBENZOYL)AMINO-4-PHENYLBUTANOYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXAMIDE G - 51
1kzk_A_431kzk   A     EGLETHYLENE GLYCOL P - 63
1kzk_A_431kzk   A     EGLETHYLENE GLYCOL V - 64
1kzk_A_431kzk   A     EGLETHYLENE GLYCOL E - 65

Clusters included in this Subclass
CLUSTER: HA.1.32
CLUSTER: HA.1.60
CLUSTER: HA.2.41