Information on SUBCLASS 2.3.4 |
Subclass Accession number: 7777
Subclass: 2.3.4 ![]() Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 7 Average sequence ID (%) : 13.2 +/- 15.1 Average RMSD (Å) : 0.457 +/- 0.113 Consensus geometry
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Consensus Sequence: | XXccph |
(φψ)-conformation: | bbeabb |
Pattern: | [fity] | x | x | [DG] | [DGKNT] | [deqr] | [ily] | [AFLWY] | [flmvy] |
Conservation: | -0.447 | -1.145 | -0.951 | 2.250 | 0.111 | -0.114 | -0.108 | 0.650 | -0.246 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1abr_A_75 | 1abr | A | 78 | 86 | YRAGTQSYF | EE-SSEEEE | bbbeabbbb |
1cf2_O_286 | 1cf2 | O | 286 | 294 | TVVDNEIYY | EEETTEEEE | bbbeabbbb |
1dpj_A_191 | 1dpj | A | 197 | 205 | IGLGDEYAE | EEETTEEEE | bbbeabbbx |
1flg_A_65 | 1flg | A | 65 | 73 | IVSDGVIYV | EEETTEEEE | bbbeabxbb |
1h2w_A_80 | 1h2w | A | 80 | 88 | FKKGKRYFY | EEETTEEEE | bxbeabbbb |
2bat_*_353 | 2bat | - | 354 | 362 | FDNGNDLWM | EEETTEEEE | bxbeaxbbb |
3cla_*_179 | 3cla | - | 179 | 187 | QQEGDRLLL | EEETTEEEE | bxbeabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dpj_A_191 | 1dpj | A | NAGN-ACETYL-D-GLUCOSAMINE | G - 200 |
1dpj_A_191 | 1dpj | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 202 |
1dpj_A_191 | 1dpj | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 203 |
Clusters included in this Subclass |
CLUSTER: HA.3.44 |