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Information on SUBCLASS 2.3.5
Subclass Accession number: 7778
Subclass: 2.3.5 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 12.5 +/- 14.2
Average RMSD (Å) : 0.450 +/- 0.274

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XpGpXX
(φψ)-conformation: bbeabb
Pattern: [agkqt][enqy][GK][DEPS]x[ltvy][ailtv]x
Conservation:-0.706-0.2932.2690.552-0.662-0.258-0.291-0.611
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aug_A_321aug   A3239AEGPASIVEETTEEEEbbeaxbbb
1d3c_A_6471d3c   A655662KQGSTVTWEETTEEEEbbeaxbbx
1dpj_A_1911dpj   A198205GLGDEYAEEETTEEEEbbeabbbx
1lyv_A_3061lyv   A307314TYGSITVEEETTEEEEbbeabbbb
1qdl_A_3781qdl   A381388LNKELLRIEETTEEEEbbeabbbb
3cla_*_1793cla   -180187QEGDRLLLEETTEEEExbeabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d3c_A_6471d3c   A     GLCGLUCOSE E - 649
1d3c_A_6471d3c   A     GLCGLUCOSE K - 651
1d3c_A_6471d3c   A     GLCGLUCOSE W - 662
1dpj_A_1911dpj   A     NAGN-ACETYL-D-GLUCOSAMINE G - 200
1dpj_A_1911dpj   A     NAGN-ACETYL-D-GLUCOSAMINE E - 202
1dpj_A_1911dpj   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 203

Clusters included in this Subclass
CLUSTER: HA.1.29