Information on SUBCLASS 2.3.8 |
Subclass Accession number: 7781
Subclass: 2.3.8 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 19.0 +/- 21.9 Average RMSD (Å) : 0.250 +/- 0.100 Consensus geometry
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Consensus Sequence: | XXccXX |
(φψ)-conformation: | bbeabb |
Pattern: | [CIT] | [AKV] | x | [DG] | [DN] | x | x |
Conservation: | -0.063 | -0.394 | -0.945 | 1.081 | 1.654 | -0.945 | -0.387 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aoe_A_177 | 1aoe | A | 177 | 183 | IKEGDFT | EEETTEE | xbbeaxb |
1cf2_O_286 | 1cf2 | O | 286 | 292 | TVVDNEI | EEETTEE | bbbeabb |
1i1q_A_50 | 1i1q | A | 62 | 68 | TALGDTV | EEETTEE | bbbeabb |
1i2k_A_241 | 1i2k | A | 245 | 251 | CACGDVS | EEETTEE | abbeaxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i1q_A_50 | 1i1q | A | TRPTRYPTOPHAN | K - 50 |
1i1q_A_50 | 1i1q | A | TRPTRYPTOPHAN | S - 51 |
1i1q_A_50 | 1i1q | A | TRPTRYPTOPHAN | L - 52 |
Clusters included in this Subclass |
CLUSTER: HA.1.84 |
CLUSTER: HA.3.134 |