Information on SUBCLASS 2.3.10 |
Subclass Accession number: 7783
Subclass: 2.3.10 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 14.8 +/- 15.1 Average RMSD (Å) : 0.533 +/- 0.058 Consensus geometry
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Consensus Sequence: | XpcpXX |
(φψ)-conformation: | bbeabp |
Pattern: | [CKR] | [AGV] | [TV] | [IV] | x | x | x | [QRS] | [DG] | [EKN] | [TV] | x | [SV] | x | x | x | [ILT] | [AW] |
Conservation: | -0.342 | -0.725 | 0.904 | 2.324 | -0.597 | -0.980 | -0.980 | 0.041 | 1.464 | 0.552 | 1.222 | -0.139 | -0.217 | -0.469 | -0.278 | -1.874 | -0.086 | 0.181 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ffv_C_196 | 1ffv | C | 198 | 215 | CAVVMRKSGNTVSHIRIA | EEEEEEEETTEEEEEEEE | bbbbbbbbeabxabbbbb |
1jz7_A_254 | 1jz7 | A | 255 | 272 | RVTVSLWQGETQVASGTA | EEEEEEEETTEEEEEEEE | bbbbbbbbeabxabbbbb |
1m6i_A_562 | 1m6i | A | 562 | 579 | KGVIFYLRDKVVVGIVLW | EEEEEEEETTEEEEEEEE | bebbxbbbeabxabbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jz7_A_254 | 1jz7 | A | MGMAGNESIUM ION | T - 257 |
1jz7_A_254 | 1jz7 | A | DMSDIMETHYL SULFOXIDE | T - 257 |
1jz7_A_254 | 1jz7 | A | MGMAGNESIUM ION | Q - 266 |
1jz7_A_254 | 1jz7 | A | DMSDIMETHYL SULFOXIDE | S - 269 |
1jz7_A_254 | 1jz7 | A | DMSDIMETHYL SULFOXIDE | G - 270 |
1jz7_A_254 | 1jz7 | A | DMSDIMETHYL SULFOXIDE | T - 271 |
1jz7_A_254 | 1jz7 | A | DMSDIMETHYL SULFOXIDE | A - 272 |
1jz7_A_254 | 1jz7 | A | DMSDIMETHYL SULFOXIDE | P - 273 |
Clusters included in this Subclass |
CLUSTER: HA.3.85 |