Information on SUBCLASS 2.4.6 |
Subclass Accession number: 7800
Subclass: 2.4.6 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 11.8 +/- 14.7 Average RMSD (Å) : 0.483 +/- 0.133 Consensus geometry
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Consensus Sequence: | hppcXh |
(φψ)-conformation: | bbllbb |
Pattern: | x | x | [hiv] | [civ] | [deknr] | [DNRT] | [DEG] | [hmvy] | [KLV] | [iltvw] | [FGILV] | [ACTV] | [FGIV] |
Conservation: | -0.966 | -0.970 | -0.058 | 0.264 | -0.599 | 1.076 | 2.257 | -0.530 | 0.910 | -1.052 | -0.378 | 0.759 | -0.713 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a25_A_161 | 1a25 | A | 165 | 177 | QAHIDREVLIVVV | EEEESSSEEEEEE | bbbbblvbxbbbb |
1bag_*_402 | 1bag | - | 402 | 414 | SFQVNDGKLTGTI | EEEE-SSEEEEEE | bbbxbllbxbebx |
1e94_A_2 | 1e94 | A | 4 | 16 | VSVRRNGHVVIAG | EEEE-SSEEEEEE | bbbbbllbbbbbb |
1k3b_A_67 | 1k3b | A | 68 | 80 | FEIVLNDYKWFAF | EEEEETTEEEEEE | bbbbblvbbbbbx |
1l0o_A_64 | 1l0o | A | 67 | 79 | SVIIEDGVVHLTV | EEEE-SSEEEEEE | bbbxbvvbbbbbb |
1qm4_A_54 | 1qm4 | A | 58 | 70 | ETVCKTGMVLLCG | EEEE-SSEEEEEE | bbbbblvbbbbbe |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1l0o_A_64 | 1l0o | A | ADPADENOSINE-5'-DIPHOSPHATE | D - 81 |
Clusters included in this Subclass |
CLUSTER: HA.2.46 |
CLUSTER: HA.4.74 |