Information on SUBCLASS 2.6.1 |
Subclass Accession number: 7816
Subclass: 2.6.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 23 Average sequence ID (%) : 13.1 +/- 16.5 Average RMSD (Å) : 0.374 +/- 0.142 Consensus geometry
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Consensus Sequence: | XXXXXX |
(φψ)-conformation: | abplbb |
Pattern: | x | x | [adegnqrst] | [ehkpqs] | [agknrt] | x | x |
Conservation: | -0.366 | -0.327 | -0.059 | 0.511 | 1.968 | -0.604 | -1.122 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a2v_A_444 | 1a2v | A | 446 | 452 | RVYPNVN | EEETTEE | xabpvbb |
1a2z_A_179 | 1a2z | A | 179 | 185 | FFLLGKN | EEETTEE | babpvbx |
1af7_*_273 | 1af7 | - | 275 | 281 | LRGQTVY | EEETTEE | xabplbb |
1aop_*_491 | 1aop | - | 495 | 501 | GKAPGRY | EEETTEE | pabpvbb |
1dci_A_57 | 1dci | A | 61 | 67 | SAQKHVL | EEETTEE | xabpvbb |
1deu_A_110 | 1deu | A | 112 | 118 | CNEFKEC | EEETTEE | babpvbb |
1dqs_A_368 | 1dqs | A | 368 | 374 | LSAIGTP | EEETTEE | xabxvbx |
1gg4_A_318 | 1gg4 | A | 321 | 327 | QLAENQL | EEETTEE | xabxUbb |
1h5q_A_157 | 1h5q | A | 157 | 163 | QSSLNGS | EEETTEE | babplbx |
1hp1_A_259 | 1hp1 | A | 259 | 265 | MAAENKK | EEETTEE | xabplbx |
1iqy_A_419 | 1iqy | A | 421 | 427 | QLAPGLG | EEETTEE | xabpvxb |
1k32_A_212 | 1k32 | A | 216 | 222 | EVNSGAF | EEETTEE | xabpvbb |
1kae_A_107 | 1kae | A | 110 | 116 | ETQPGVR | EEETTEE | xabpvbx |
1ksi_A_430 | 1ksi | A | 432 | 438 | LVSANSI | EEETTEE | xabpvbb |
1lwy_A_48 | 1lwy | A | 49 | 55 | EQSPAHW | EEETTEE | xabpvbb |
1mkp_*_208 | 1mkp | - | 209 | 215 | EILPFLY | EEETTEE | xabpvbb |
1nsj_*_184 | 1nsj | - | 184 | 190 | EAFPGKK | EEETTEE | babpvbx |
1oac_A_512 | 1oac | A | 514 | 520 | LIDHNIV | EEETTEE | xabxvbb |
1omz_A_180 | 1omz | A | 185 | 191 | STSSGIY | EEETTEE | babpvbb |
1pii_*_431 | 1pii | - | 431 | 437 | ESQPGIK | EEETTEE | babpvbx |
1sat_*_122 | 1sat | - | 122 | 128 | QDRPGHY | EEETTEE | babpvbx |
1vhr_A_30 | 1vhr | A | 32 | 38 | EVTPRIY | EEETTEE | xabpvbb |
1vrt_B_336 | 1vrt | B | 342 | 348 | YQEPFKN | EEETTEE | babpvbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gg4_A_318 | 1gg4 | A | MSESELENOMETHIONINE | L - 327 |
1gg4_A_318 | 1gg4 | A | MSESELENOMETHIONINE | L - 329 |
1gg4_A_318 | 1gg4 | A | MSESELENOMETHIONINE | D - 330 |
1kae_A_107 | 1kae | A | MSESELENOMETHIONINE | Q - 118 |
1kae_A_107 | 1kae | A | MSESELENOMETHIONINE | Q - 119 |
1omz_A_180 | 1omz | A | UD2URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE | Y - 193 |
Clusters included in this Subclass |
CLUSTER: HA.1.7 |
CLUSTER: HA.2.12 |
CLUSTER: HA.3.18 |