Logo
Information on SUBCLASS 6.17.1
Subclass Accession number: 782
Subclass: 6.17.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>75 %)  2.7.1 (>75 %)  2.7.1.1123.5 (>75 %)  3.5.1 (>75 %)  3.5.1.5
GO : GO:0004672 (>75 %)  GO:0004872 (>75 %)  GO:0004888 (>75 %)  GO:0005524 (>75 %)  GO:0009039 (>75 %)  GO:0016151 (>75 %)  GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016773 (>75 %)  GO:0016810 (>75 %)  GO:0016811 (>75 %)  GO:0017076 (>75 %)  GO:0030554 (>75 %)  GO:0046914 (>75 %)  
SCOP : 51337 (>75 %)  51338 (>75 %)  51339 (>75 %)  56111 (>75 %)  56112 (>75 %)  88854 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 13.3 +/- 14.2
Average RMSD (Å) : 0.675 +/- 0.150

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXpXppPXXh
(φψ)-conformation: bbaabbwpbb
Pattern: x[DQW][CHNT]x[EKT]x[P]x[AKMT]x
Conservation:-0.3860.011-0.181-0.5040.144-0.3862.756-0.475-0.269-0.709
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dl2_A_4821dl2   A483492SDCITLPTKKEESSSSS-EEabaaxbwxxx
1iwm_A_1551iwm   A155164YDTKTQPAMPEETTSSS-EExxaabbwxbp
1mju_L_841mju   L8998LQHLEYPFTFEE-SSSS-EEbxaabxwxbb
3chb_D_823chb   D8796VWNNKTPRAIEETTSSSEEEbxaabbwpxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mju_L_841mju   L     GOLGLYCEROL Y - 86
1mju_L_841mju   L     GOLGLYCEROL H - 91
3chb_D_823chb   D     UNXUNKNOWN ATOM OR ION C - 86
3chb_D_823chb   D     GALD-GALACTOSE W - 88
3chb_D_823chb   D     NGAN-ACETYL-D-GALACTOSAMINE W - 88
3chb_D_823chb   D     SIAO-SIALIC ACID W - 88
3chb_D_823chb   D     GALD-GALACTOSE N - 90
3chb_D_823chb   D     NGAN-ACETYL-D-GALACTOSAMINE N - 90
3chb_D_823chb   D     GALD-GALACTOSE K - 91
3chb_D_823chb   D     NGAN-ACETYL-D-GALACTOSAMINE K - 91
3chb_D_823chb   D     GALD-GALACTOSE A - 95

Clusters included in this Subclass
CLUSTER: HA.5.147
CLUSTER: HA.7.63