Information on SUBCLASS 6.19.1 |
Subclass Accession number: 784
Subclass: 6.19.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005509 (>50 %) GO:0005515 (>50 %) SCOP : 50938 (>75 %) 63825 (>50 %) 63826 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 9.8 +/- 10.3 Average RMSD (Å) : 1.500 +/- 0.361 Consensus geometry
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Consensus Sequence: | hpXppXXXhX |
(φψ)-conformation: | pbpaabppbb |
Pattern: | x | [VWY] | x | x | x | [PVW] | [ENR] | x | [KS] | [DE] | [FQ] | [EGK] | [PS] | [AIV] | x | [AV] | x |
Conservation: | -0.528 | 0.622 | -0.988 | -0.758 | -0.873 | -0.988 | 0.392 | -0.758 | 1.279 | 2.452 | 0.451 | -0.298 | 0.727 | 0.392 | -0.873 | 0.849 | -1.103 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jhf_A_164 | 1jhf | A | 164 | 180 | KVELLPENSEFKPIVVD | EEEEE-SSTT---EEEE | bbbbxxbbaaxbxxbbb |
1o75_A_395 | 1o75 | A | 395 | 411 | EYTVEVRFKEFGSVRAK | EEEEEEE-SSS--EEEE | xbbbbxbxaabxxbbbx |
1qks_A_516 | 1qks | A | 517 | 533 | VWFSVWNGKDQESALVV | EEEEEE--TTS--EEEE | bbbxbxbxaabxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qks_A_516 | 1qks | A | DHEHEME D | W - 522 |
Clusters included in this Subclass |
CLUSTER: HA.7.81 |