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Information on SUBCLASS 3.4.1
Subclass Accession number: 7842
Subclass: 3.4.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 27

Average sequence ID (%) : 10.1 +/- 17.5
Average RMSD (Å) : 0.459 +/- 0.162

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXXXpXh
(φψ)-conformation: bbllabb
Pattern: xxx[adegnq]xx[acfgilpvwy]
Conservation:0.1280.104-0.3081.962-0.032-0.531-1.322
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1am5_*_21am5   -814NEADTEYEETTTEEbblUabb
1aor_A_1761aor   A177183MNDGHRAEETTTEEbblgaxb
1aui_A_1881aui   A190196LMNQQFLEETTTEEbbllabx
1ava_A_3611ava   A365371EIDGKVIEETTTEEbbUvabb
1bu7_A_3391bu7   A340346VLGGEYPEETTTEEbxUvabw
1cvl_*_221cvl   -2228KFANVVDEETTTEEbblvaxx
1dpj_A_71dpj   A814NYLNAQYEETTTEEbblvabb
1e5d_A_221e5d   A2228DFHGYTLEETTTEExxlvabb
1euv_A_5031euv   A509515NLNQSHWEETTTEExbllabb
1f1s_A_9431f1s   A944950LINNQFKEETTTEEbxlvabb
1foh_A_3471foh   A347353SKDERVFEETTTEEbbvlabb
1g6s_A_2161g6s   A217223NQHYQQFEETTTEExxlvabb
1hdg_O_2981hdg   O299305VIGGKLVEETTTEEbbvUaxb
1hn0_A_7241hn0   A727733SLEGQYGEETTTEEbblvabb
1iqy_A_2311iqy   A232238VTGGNHIEETTTEEbblgaxb
1jk7_A_1621jk7   A164170IVDEKIFEETTTEEbxlUabx
1knl_A_511knl   A5258RVYGDKCEETTTEEbbvgabb
1lf2_A_41lf2   A1016DFQNIMFEETTTEExblvabb
1lfw_A_621lfw   A6571NFANYAGEETTTEEbxlvabb
1lya_A_81lya   A915NYMDAQYEETTTEEbblUabb
1n7o_A_8451n7o   A846852TISNQFQEETTTEExbllabb
1qq4_A_81qq4   A1016SINNASLEETTTEEbbllaxb
1qrp_E_71qrp   E814NYLDMEYEETTTEExbvUabb
1uqu_A_2031uqu   A205211TRSAKSHEETTTEEbblgabb
3cms_*_23cms   -814NYLDSQYEETTTEEbxlvabb
4lip_D_224lip   D2228KYAGVLEEETTTEEbxlvabp
4pep_*_24pep   -814NYLDTEYEETTTEEbxlUabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aor_A_1761aor   A     PTETUNGSTOPTERIN COFACTOR M - 177
1aor_A_1761aor   A     NAWSODIUM ION, 3 WATERS COORDINATED M - 177
1aor_A_1761aor   A     PTETUNGSTOPTERIN COFACTOR N - 178
1aor_A_1761aor   A     PTETUNGSTOPTERIN COFACTOR H - 181
1aor_A_1761aor   A     NAWSODIUM ION, 3 WATERS COORDINATED H - 181
1aor_A_1761aor   A     FS4IRON/SULFUR CLUSTER R - 182
1aor_A_1761aor   A     PTETUNGSTOPTERIN COFACTOR R - 182
1aor_A_1761aor   A     NAWSODIUM ION, 3 WATERS COORDINATED R - 182
1aor_A_1761aor   A     FEFE (III) ION R - 182
1aor_A_1761aor   A     PTETUNGSTOPTERIN COFACTOR A - 183
1aor_A_1761aor   A     NAWSODIUM ION, 3 WATERS COORDINATED A - 183
1aor_A_1761aor   A     PTETUNGSTOPTERIN COFACTOR A - 184
1e5d_A_221e5d   A     FEOMU-OXO-DIIRON F - 23
1e5d_A_221e5d   A     OXYOXYGEN MOLECULE F - 23
1e5d_A_221e5d   A     FMNFLAVIN MONONUCLEOTIDE H - 24
1e5d_A_221e5d   A     FEOMU-OXO-DIIRON H - 24
1e5d_A_221e5d   A     OXYOXYGEN MOLECULE H - 24
1e5d_A_221e5d   A     FMNFLAVIN MONONUCLEOTIDE Y - 26
1e5d_A_221e5d   A     OXYOXYGEN MOLECULE Y - 26
1knl_A_511knl   A     GOLGLYCEROL D - 60
1knl_A_511knl   A     GOLGLYCEROL A - 61
1lf2_A_41lf2   A     R373-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE M - 15
1qrp_E_71qrp   E     IVAISOVALERIC ACID M - 12

Clusters included in this Subclass
CLUSTER: HA.4.9