Information on SUBCLASS 3.7.2 |
Subclass Accession number: 7850
Subclass: 3.7.2 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 35.5 +/- 23.7 Average RMSD (Å) : 0.580 +/- 0.130 Consensus geometry
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Consensus Sequence: | pGphGpV |
(φψ)-conformation: | bbaaepb |
Pattern: | [FILVY] | [EKQ] | [CIKL] | x | [AEQR] | [cktv] | [I] | [G] | [AEK] | [G] | [AEQT] | [FY] | [G] | [dek] | [V] | [cfmy] | x | [AG] | [dhr] | x |
Conservation: | -0.373 | 0.173 | -0.789 | -1.162 | -0.395 | -1.020 | 0.828 | 1.752 | -0.209 | 1.752 | -0.532 | 1.159 | 1.752 | -0.663 | 0.828 | -0.632 | -0.723 | 0.244 | -1.018 | -0.976 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1blx_A_13 | 1blx | A | 13 | 32 | YECVAEIGEGAYGKVFKARD | EEEEEEEEEETTEEEEEEEE | bbpabxaebbaaexbbxbbx |
1byg_A_195 | 1byg | A | 195 | 214 | LKLLQTIGKGEFGDVMLGDY | EEEEEEEEE-SS-EEEEEEE | xbxabxabbbaaexbbxbbb |
1gz8_A_4 | 1gz8 | A | 4 | 23 | FQKVEKIGEGTYGVVYKARN | EEEEEEEEE-SSSEEEEEEE | bbxabxaebxaaexbbxbbx |
1jpa_A_629 | 1jpa | A | 629 | 648 | VKIEQVIGAGEFGEVCSGHL | EEEEEEEEE-SSSEEEEEEE | xbxabxabbbaaexbbbbbb |
1mp8_A_422 | 1mp8 | A | 422 | 441 | IELGRCIGEGQFGDVHQGIY | EEEEEEEEE-SSSEEEEEEE | bbxbxxaebbaaexbbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gz8_A_4 | 1gz8 | A | MBPMBP BINDING SITE FOR CHAIN A | I - 10 |
1gz8_A_4 | 1gz8 | A | MBPMBP BINDING SITE FOR CHAIN A | G - 11 |
1gz8_A_4 | 1gz8 | A | MBPMBP BINDING SITE FOR CHAIN A | E - 12 |
Clusters included in this Subclass |
CLUSTER: HA.3.53 |