Information on SUBCLASS 3.8.2 |
Subclass Accession number: 7852
Subclass: 3.8.2 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 22.2 +/- 18.3 Average RMSD (Å) : 0.467 +/- 0.153 Consensus geometry
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Consensus Sequence: | hXXXXGX |
(φψ)-conformation: | pbplIeb |
Pattern: | x | [TV] | [LY] | x | [PQR] | x | x | [G] | x |
Conservation: | -0.761 | 0.227 | 0.105 | -0.824 | -0.256 | -0.572 | 0.506 | 2.335 | -0.761 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e4c_P_149 | 1e4c | P | 149 | 157 | ATLLQHHGL | EEEETTTEE | bbxbplIeb |
1gqz_A_201 | 1gqz | A | 205 | 213 | RVYERGAGE | EEEETTTEE | bbxxpvNex |
1ojr_A_206 | 1ojr | A | 206 | 214 | LVLWPFHGV | EEEETTTEE | bbxbpvIeb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e4c_P_149 | 1e4c | P | ZNZINC ION | L - 152 |
1e4c_P_149 | 1e4c | P | ZNZINC ION | H - 155 |
1ojr_A_206 | 1ojr | A | ZNZINC ION | W - 209 |
1ojr_A_206 | 1ojr | A | PO4PHOSPHATE ION | W - 209 |
1ojr_A_206 | 1ojr | A | 2HADIHYDROXYACETONE | W - 209 |
1ojr_A_206 | 1ojr | A | ZNZINC ION | H - 212 |
1ojr_A_206 | 1ojr | A | PO4PHOSPHATE ION | H - 212 |
1ojr_A_206 | 1ojr | A | 2HADIHYDROXYACETONE | H - 212 |
1ojr_A_206 | 1ojr | A | GOLGLYCEROL | H - 212 |
1ojr_A_206 | 1ojr | A | ZNZINC ION | G - 213 |
1ojr_A_206 | 1ojr | A | 2HADIHYDROXYACETONE | F - 215 |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.2.117 |