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Information on SUBCLASS 3.8.2
Subclass Accession number: 7852
Subclass: 3.8.2 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 22.2 +/- 18.3
Average RMSD (Å) : 0.467 +/- 0.153

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXXXXGX
(φψ)-conformation: pbplIeb
Pattern: x[TV][LY]x[PQR]xx[G]x
Conservation:-0.7610.2270.105-0.824-0.256-0.5720.5062.335-0.761
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e4c_P_1491e4c   P149157ATLLQHHGLEEEETTTEEbbxbplIeb
1gqz_A_2011gqz   A205213RVYERGAGEEEEETTTEEbbxxpvNex
1ojr_A_2061ojr   A206214LVLWPFHGVEEEETTTEEbbxbpvIeb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e4c_P_1491e4c   P     ZNZINC ION L - 152
1e4c_P_1491e4c   P     ZNZINC ION H - 155
1ojr_A_2061ojr   A     ZNZINC ION W - 209
1ojr_A_2061ojr   A     PO4PHOSPHATE ION W - 209
1ojr_A_2061ojr   A     2HADIHYDROXYACETONE W - 209
1ojr_A_2061ojr   A     ZNZINC ION H - 212
1ojr_A_2061ojr   A     PO4PHOSPHATE ION H - 212
1ojr_A_2061ojr   A     2HADIHYDROXYACETONE H - 212
1ojr_A_2061ojr   A     GOLGLYCEROL H - 212
1ojr_A_2061ojr   A     ZNZINC ION G - 213
1ojr_A_2061ojr   A     2HADIHYDROXYACETONE F - 215
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e4c_P_1491e4c   P ACTACTIVE CENTER DEFINDED BY THE ZINC ION AND THE FOUR ZINC COORDINATING RESIDUESH - 155
1ojr_A_2061ojr   A ZNZN BINDING SITE. THE ZN ION INTERACTS WITH HET COMPOUNDS 2HA AND PO4. THESE RESIDUES HAVE 50% OCCUPANCY AND EXIST AS TWO SEPARATE CONFORMATIONS FOR THE SITEH - 212

Clusters included in this Subclass
CLUSTER: HA.2.117