Information on SUBCLASS 3.9.1 |
Subclass Accession number: 7853
Subclass: 3.9.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 21.2 +/- 24.8 Average RMSD (Å) : 0.300 +/- 0.115 Consensus geometry
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Consensus Sequence: | cXXccph |
(φψ)-conformation: | pbpeabb |
Pattern: | [ltv] | [KNR] | x | [eps] | [DEG] | [DGS] | [KNQTW] | [FHLWY] | [ehsy] | [hilv] | [NRSTY] |
Conservation: | -0.587 | 1.582 | -0.012 | -0.764 | 1.297 | 0.929 | -0.777 | 0.951 | -1.146 | -0.978 | -0.495 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aop_*_347 | 1aop | - | 349 | 359 | VKGIDDNWHLT | EE-STTEEEEE | bxxxeaxbbbx |
1enx_A_25 | 1enx | A | 28 | 38 | TNGPGGQFSVN | EE-STTEEEEE | bxbxeaxbbbb |
1ivy_A_21 | 1ivy | A | 26 | 36 | LKSSGSKHLHY | EE-STTEEEEE | bxbpeaxbxxb |
1nrg_A_248 | 1nrg | A | 248 | 258 | HRGEEDWLYER | EE-STTEEEEE | bxbxeaxbbbx |
1pvx_A_25 | 1pvx | A | 28 | 38 | TNNSGGTYEIT | EE-STTEEEEE | bxbxeabbbbb |
1xnb_*_15 | 1xnb | - | 19 | 29 | VNGSGGNYSVN | EE-STTEEEEE | bxxxeaxbbbb |
1yna_*_25 | 1yna | - | 28 | 38 | TNLEGGTYEIS | EE-STTEEEEE | bxxxeabbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1yna_*_25 | 1yna | * | PCAPYROGLUTAMIC ACID | A - 25 |
1yna_*_25 | 1yna | * | PCAPYROGLUTAMIC ACID | T - 26 |
Clusters included in this Subclass |
CLUSTER: HA.4.40 |