Information on SUBCLASS 3.19.1 |
Subclass Accession number: 7863
Subclass: 3.19.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 6.1 +/- 12.0 Average RMSD (Å) : 0.433 +/- 0.153 Consensus geometry
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Consensus Sequence: | XhhXXXh |
(φψ)-conformation: | pbeaNbb |
Pattern: | [CVY] | x | x | [AFV] | [CG] | [CLT] | [DV] | [GRS] | [PVY] | x | x |
Conservation: | 0.396 | -0.873 | -0.873 | -0.450 | 2.184 | 0.396 | 1.019 | -0.238 | -0.873 | 0.396 | -1.084 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eqg_A_46 | 1eqg | A | 47 | 57 | CVRFGLDRYQC | EEEETTTEEEE | xbxbeaNxbbb |
1h16_A_414 | 1h16 | A | 414 | 424 | YAIACCVSPMI | EEEETTTEEEE | xbxxeaNbwbx |
1j98_A_18 | 1j98 | A | 24 | 34 | VHKVGTDGVVN | EEEETTTEEEE | bbxbeaNbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eqg_A_46 | 1eqg | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 55 |
1h16_A_414 | 1h16 | A | PYRPYRUVIC ACID | A - 417 |
1h16_A_414 | 1h16 | A | PYRPYRUVIC ACID | C - 418 |
1h16_A_414 | 1h16 | A | PYRPYRUVIC ACID | C - 419 |
1h16_A_414 | 1h16 | A | PYRPYRUVIC ACID | S - 421 |
1j98_A_18 | 1j98 | A | OCSCYSTEINESULFONIC ACID | R - 39 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h16_A_414 | 1h16 | A | PYRPYR BINDING SITE FOR CHAIN A | C - 418 |
Clusters included in this Subclass |
CLUSTER: HA.2.88 |