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Information on SUBCLASS 4.2.2
Subclass Accession number: 7886
Subclass: 4.2.2 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 16.2 +/- 16.0
Average RMSD (Å) : 0.460 +/- 0.178

Consensus geometry
d (Å): 5 delta (°): 135-180 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXppGXXh
(φψ)-conformation: bbaagpbb
Pattern: x[FILMTV]xx[DENRS][DNS][dg]xx[giltv]x[dgnqs][aet]
Conservation:-0.7320.754-0.633-0.5710.6951.7542.091-0.882-0.597-0.773-0.584-0.387-0.134
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e4e_A_2861e4e   A293305MFLQDNGRIVLNEEEE-TT--EEEEEbbbxaavxxbxab
1ec7_A_351ec7   A4254IIKDNSGHTGVGEEEEETTS-EEEEEbbbbaavbbbbbb
1h8e_A_521h8e   A5264MVEFSSGLKGMSLEEEETTS-EEEEExbbxaagpbbbxa
1k3x_A_531k3x   A5567LTHFSNDLTLYSHEEEETTS-EEEEEbxxbaavxbxxbb
1k82_A_921k82   A93105DLVMSNGKVLRYTEEEETTS-EEEEEbbxxaavxbxbbb
1m6i_A_2421m6i   A242254MVKLNDGSQITYEEEEETTS-EEEEEbbbxaagpbbxba
1muc_A_311muc   A3850RVRCSDGVEGIGEEEEETTS-EEEEEbbbbaavxbbbbb
1oac_A_4681oac   A472484WIFHENGTIGIDAEEEETTS-EEEEEbbxbaavxbbbbb
1ofg_A_2521ofg   A256268QMRFRSGALSHGAEEEETTS-EEEEEbbbbaagxbbbbb
1unn_C_2851unn   C289301KLKFDDFQQTTQEEEEETTS-EEEEEbbbbaavxbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e4e_A_2861e4e   A     ADPADENOSINE-5'-DIPHOSPHATE R - 290
1e4e_A_2861e4e   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID R - 290
1e4e_A_2861e4e   A     MGMAGNESIUM ION R - 290
1e4e_A_2861e4e   A     ADPADENOSINE-5'-DIPHOSPHATE D - 292
1e4e_A_2861e4e   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID D - 292
1e4e_A_2861e4e   A     MGMAGNESIUM ION D - 292
1e4e_A_2861e4e   A     ADPADENOSINE-5'-DIPHOSPHATE F - 294
1e4e_A_2861e4e   A     ADPADENOSINE-5'-DIPHOSPHATE N - 304
1e4e_A_2861e4e   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID N - 304
1e4e_A_2861e4e   A     MGMAGNESIUM ION N - 304
1e4e_A_2861e4e   A     ADPADENOSINE-5'-DIPHOSPHATE E - 305
1e4e_A_2861e4e   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID E - 305
1e4e_A_2861e4e   A     MGMAGNESIUM ION E - 305
1e4e_A_2861e4e   A     MGMAGNESIUM ION V - 306
1e4e_A_2861e4e   A     ADPADENOSINE-5'-DIPHOSPHATE N - 307
1e4e_A_2861e4e   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID N - 307
1e4e_A_2861e4e   A     MGMAGNESIUM ION N - 307
1h8e_A_521h8e   A     GOLGLYCEROL M - 62
1oac_A_4681oac   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE Y - 468
1oac_A_4681oac   A     CACALCIUM ION Y - 468
1oac_A_4681oac   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE A - 486
1oac_A_4681oac   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE T - 487
1oac_A_4681oac   A     CACALCIUM ION T - 487
1oac_A_4681oac   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE G - 488
1oac_A_4681oac   A     CACALCIUM ION G - 488
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e4e_A_2861e4e   A AC1PHY BINDING SITE FOR CHAIN AR - 290

Clusters included in this Subclass
CLUSTER: HA.3.97
CLUSTER: HA.5.33