Information on SUBCLASS 4.2.4 |
Subclass Accession number: 7888
Subclass: 4.2.4 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 21.2 +/- 18.6 Average RMSD (Å) : 0.575 +/- 0.150 Consensus geometry
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Consensus Sequence: | XXXpGXXh |
(φψ)-conformation: | bbaagpbb |
Pattern: | x | [IV] | x | x | [ANST] | [DS] | [G] | [ASV] | x | x | [AFKT] |
Conservation: | -0.520 | 1.032 | -0.725 | -0.646 | -0.213 | 0.906 | 2.344 | -0.278 | -0.554 | -0.486 | -0.861 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ems_A_104 | 1ems | A | 113 | 123 | LIIDSDGVTRA | EEE-TTS-EEE | bbbxaavbxab |
1fl2_A_303 | 1fl2 | A | 304 | 314 | QIETASGAVLK | EEEETTS-EEE | bbxbaagxbbb |
1m6i_A_242 | 1m6i | A | 242 | 252 | MVKLNDGSQIT | EEEETTS-EEE | bbbxaagpbbx |
1n8i_A_346 | 1n8i | A | 349 | 359 | AIVDTDGSEVF | EEEETT--EEE | abbxaavxxxp |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ems_A_104 | 1ems | A | EMCETHYL MERCURY ION | P - 108 |
1ems_A_104 | 1ems | A | EMCETHYL MERCURY ION | W - 109 |
1ems_A_104 | 1ems | A | EMCETHYL MERCURY ION | N - 110 |
1ems_A_104 | 1ems | A | EMCETHYL MERCURY ION | T - 111 |
Clusters included in this Subclass |
CLUSTER: HA.4.110 |
CLUSTER: HA.5.109 |