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Information on SUBCLASS 4.5.1
Subclass Accession number: 7894
Subclass: 4.5.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 25.3 +/- 26.0
Average RMSD (Å) : 0.345 +/- 0.230

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XhGXXXXX
(φψ)-conformation: bbeaalpb
Pattern: x[dgtv][fgilvy][G][ikl][eflm][gkq][afiklv][CDGNSTV]x
Conservation:-1.000-0.575-0.5032.4270.058-0.287-0.257-0.475-0.388-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
153l_*_90153l   -9097.GFGLMQVD..EETTTTEE..xbeaalxx.
1b7b_A_1931b7b   A194202PVVGQELKG.EEETTTTEE.wbbeaavxx.
1chk_A_441chk   A4452YTGGIIGFC.EEETTTTEE.xbbeaavxb.
1f6w_A_161f6w   A1827KKLGLLGDSVEE-SSSS-EEbpbeaagxbb
1gd6_A_481gd6   A4856KDYGLFQIN.EEETTTTEE.bbbeaalxx.
1gu6_A_2171gu6   A217226YFDGKNKAVKEEETTTTEEEbxbeaalxxb
1lmq_*_511lmq   -5159TDYGIFQIN.EEETTTTEE.bbbeaalxx.
1qgi_A_601qgi   A6067.TIGLFGAT..EETTTTEE..xbeaavxb.
1qqy_A_531qqy   A5360.DYGIFQLN..EETTTTEE..bbeaalxx.
2eql_*_522eql   -5260SDYGLFQLN.EEETTTTEE.bxbeaalxx.
3lzt_*_513lzt   -5159TDYGILQIN.EEETTTTEE.bbbeaalxx.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gu6_A_2171gu6   A     CACALCIUM ION Y - 217
1gu6_A_2171gu6   A     CACALCIUM ION F - 218
1gu6_A_2171gu6   A     HECHEME C F - 218
1gu6_A_2171gu6   A     CACALCIUM ION V - 225
1gu6_A_2171gu6   A     HECHEME C V - 225
1lmq_*_511lmq   *     NAGN-ACETYL-D-GLUCOSAMINE D - 52
1lmq_*_511lmq   *     NAGN-ACETYL-D-GLUCOSAMINE F - 56
1lmq_*_511lmq   *     NAGN-ACETYL-D-GLUCOSAMINE Q - 57
1lmq_*_511lmq   *     NAGN-ACETYL-D-GLUCOSAMINE I - 58
1lmq_*_511lmq   *     NAGN-ACETYL-D-GLUCOSAMINE N - 59
1qgi_A_601qgi   A     GCSD-GLUCOSAMINE T - 60
1qgi_A_601qgi   A     NAGN-ACETYL-D-GLUCOSAMINE T - 60
1qgi_A_601qgi   A     GCSD-GLUCOSAMINE F - 64
1qgi_A_601qgi   A     GCSD-GLUCOSAMINE G - 65
1qgi_A_601qgi   A     GCSD-GLUCOSAMINE A - 66
1qgi_A_601qgi   A     GCSD-GLUCOSAMINE T - 67
3lzt_*_513lzt   *     ACTACETATE ION D - 52
3lzt_*_513lzt   *     ACTACETATE ION L - 56
3lzt_*_513lzt   *     ACTACETATE ION Q - 57
3lzt_*_513lzt   *     ACTACETATE ION I - 58
3lzt_*_513lzt   *     ACTACETATE ION N - 59
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gu6_A_2171gu6   A HA1HEC BINDING SITE FOR CHAIN AF - 218

Clusters included in this Subclass
CLUSTER: HA.5.27