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Information on SUBCLASS 4.6.1
Subclass Accession number: 7897
Subclass: 4.6.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 16

Average sequence ID (%) : 18.8 +/- 20.0
Average RMSD (Å) : 0.331 +/- 0.087

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XhXcGXXh
(φψ)-conformation: bbllgabb
Pattern: x[fgilmv][adegknr][degkn][DGR]xxx
Conservation:-0.385-0.489-0.3020.1982.399-0.392-0.659-0.371
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bif_*_2141bif   -217224IMDVGQSYEETTTTEEbblvvabb
1e0t_A_1221e0t   A124131LVDDGLIGEETTTTEEbxllvabb
1e44_B_421e44   B4451TGDKGRKIEETTTTEEbbllvabb
1e6y_B_20991e6y   B21022109KVKGGKSLEEGGGTEExblvvabb
1e94_A_341e94   A3643RLYNDKVIEETTTTEEbbllvabb
1fp3_A_2181fp3   A218225VQRDGQAVEETTTTEExbllvabb
1g3k_A_341g3k   A3643RLYNGKVLEETTTTEEbbllvabb
1hbn_B_1021hbn   B105112LLGGGKRAEEGGGTEExbvvvabb
1jk7_A_2551jk7   A257264FFAKRQLVEETTTTEExbllvabb
1jvn_A_4331jvn   A439446TIKGGRESEETTTTEEbblvvabx
1k32_A_1611k32   A165172VENDGINFEEGGGTEExbllvabb
1l6r_A_621l6r   A6370FGENGGIMEEGGGTEEbbllgabb
1liu_A_2161liu   A218225YIDDGLISEETTTTEExbvvvabb
1m4y_A_341m4y   A3643KLGEGKVLEETTTTEEbbllvabx
1pkl_A_1401pkl   A142149YIDDGILIEETTTTEExbvvvaxb
1q16_A_131q16   A1623TFADGHGQEETTTTEExbllvabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bif_*_2141bif   *     ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER I - 217
1bif_*_2141bif   *     ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER M - 218
1bif_*_2141bif   *     ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER D - 219
1bif_*_2141bif   *     ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER V - 220
1bif_*_2141bif   *     ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER G - 221
1e44_B_421e44   B     EDO1,2-ETHANEDIOL R - 42
1e44_B_421e44   B     EDO1,2-ETHANEDIOL W - 43
1hbn_B_1021hbn   B     MGMAGNESIUM ION E - 104

Clusters included in this Subclass
CLUSTER: HA.3.23