Information on SUBCLASS 4.6.1 |
Subclass Accession number: 7897
Subclass: 4.6.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 16 Average sequence ID (%) : 18.8 +/- 20.0 Average RMSD (Å) : 0.331 +/- 0.087 Consensus geometry
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Consensus Sequence: | XhXcGXXh |
(φψ)-conformation: | bbllgabb |
Pattern: | x | [fgilmv] | [adegknr] | [degkn] | [DGR] | x | x | x |
Conservation: | -0.385 | -0.489 | -0.302 | 0.198 | 2.399 | -0.392 | -0.659 | -0.371 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bif_*_214 | 1bif | - | 217 | 224 | IMDVGQSY | EETTTTEE | bblvvabb |
1e0t_A_122 | 1e0t | A | 124 | 131 | LVDDGLIG | EETTTTEE | bxllvabb |
1e44_B_42 | 1e44 | B | 44 | 51 | TGDKGRKI | EETTTTEE | bbllvabb |
1e6y_B_2099 | 1e6y | B | 2102 | 2109 | KVKGGKSL | EEGGGTEE | xblvvabb |
1e94_A_34 | 1e94 | A | 36 | 43 | RLYNDKVI | EETTTTEE | bbllvabb |
1fp3_A_218 | 1fp3 | A | 218 | 225 | VQRDGQAV | EETTTTEE | xbllvabb |
1g3k_A_34 | 1g3k | A | 36 | 43 | RLYNGKVL | EETTTTEE | bbllvabb |
1hbn_B_102 | 1hbn | B | 105 | 112 | LLGGGKRA | EEGGGTEE | xbvvvabb |
1jk7_A_255 | 1jk7 | A | 257 | 264 | FFAKRQLV | EETTTTEE | xbllvabb |
1jvn_A_433 | 1jvn | A | 439 | 446 | TIKGGRES | EETTTTEE | bblvvabx |
1k32_A_161 | 1k32 | A | 165 | 172 | VENDGINF | EEGGGTEE | xbllvabb |
1l6r_A_62 | 1l6r | A | 63 | 70 | FGENGGIM | EEGGGTEE | bbllgabb |
1liu_A_216 | 1liu | A | 218 | 225 | YIDDGLIS | EETTTTEE | xbvvvabb |
1m4y_A_34 | 1m4y | A | 36 | 43 | KLGEGKVL | EETTTTEE | bbllvabx |
1pkl_A_140 | 1pkl | A | 142 | 149 | YIDDGILI | EETTTTEE | xbvvvaxb |
1q16_A_13 | 1q16 | A | 16 | 23 | TFADGHGQ | EETTTTEE | xbllvabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bif_*_214 | 1bif | * | ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER | I - 217 |
1bif_*_214 | 1bif | * | ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER | M - 218 |
1bif_*_214 | 1bif | * | ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER | D - 219 |
1bif_*_214 | 1bif | * | ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER | V - 220 |
1bif_*_214 | 1bif | * | ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER | G - 221 |
1e44_B_42 | 1e44 | B | EDO1,2-ETHANEDIOL | R - 42 |
1e44_B_42 | 1e44 | B | EDO1,2-ETHANEDIOL | W - 43 |
1hbn_B_102 | 1hbn | B | MGMAGNESIUM ION | E - 104 |
Clusters included in this Subclass |
CLUSTER: HA.3.23 |