Information on SUBCLASS 6.26.1 |
Subclass Accession number: 791
Subclass: 6.26.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 50938 (>50 %) 51350 (>75 %) 51430 (>75 %) 51431 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 13.0 +/- 12.4 Average RMSD (Å) : 0.600 +/- 0.200 Consensus geometry
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Consensus Sequence: | XTXXpGXXXh |
(φψ)-conformation: | bbaaagbpbb |
Pattern: | [KMR] | x | [AFY] | x | x | [T] | x | x | [DNS] | [G] | [FKR] | x | [AEQ] | [ILW] | [LVY] | x | [QRT] | [DKT] |
Conservation: | -0.040 | -0.650 | -0.040 | -0.040 | -0.498 | 2.246 | -0.498 | -0.726 | 0.341 | 2.932 | -0.574 | -1.031 | -0.116 | -0.193 | -0.193 | -0.307 | -0.193 | -0.421 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1crz_A_192 | 1crz | A | 192 | 209 | KLAYVTFESGRSALVIQT | EEEEEE-TTSS-EEEEEE | bbxbxbaaagbxbbbbbx |
1k32_A_241 | 1k32 | A | 241 | 258 | RIYFITDIDGFGQIYSTD | EEEEEE-TTSS-EEEEEE | bxbbbbaaagbxbxbbbx |
1kqf_B_79 | 1kqf | B | 80 | 97 | MRFSETEQNGKLEWLIRK | EEEEEE-TTSS-EEEEEE | xbbbbbaaagbxbbxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1crz_A_192 | 1crz | A | MSESELENOMETHIONINE | A - 194 |
1crz_A_192 | 1crz | A | MSESELENOMETHIONINE | Y - 195 |
1crz_A_192 | 1crz | A | MSESELENOMETHIONINE | V - 196 |
1crz_A_192 | 1crz | A | MSESELENOMETHIONINE | T - 197 |
1crz_A_192 | 1crz | A | MSESELENOMETHIONINE | F - 198 |
1crz_A_192 | 1crz | A | MSESELENOMETHIONINE | I - 207 |
1kqf_B_79 | 1kqf | B | FS4IRON/SULFUR CLUSTER | M - 80 |
1kqf_B_79 | 1kqf | B | FS4IRON/SULFUR CLUSTER | I - 95 |
1kqf_B_79 | 1kqf | B | FS4IRON/SULFUR CLUSTER | K - 97 |
Clusters included in this Subclass |
CLUSTER: HA.6.109 |