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Information on SUBCLASS 5.1.1
Subclass Accession number: 7919
Subclass: 5.1.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 53

Average sequence ID (%) : 15.3 +/- 15.7
Average RMSD (Å) : 0.738 +/- 0.229

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: XXpXpGpXX
(φψ)-conformation: bbpaagppb
Pattern: xxx[degnqrst][dehknpqrst][adegknqrst][adgkns]xxxxx
Conservation:-0.854-0.290-0.3690.9960.2640.5012.604-0.180-0.653-0.472-0.969-0.580
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aut_C_301aut   C3243VLLDSKKKLACGEEE-TTS-EEEEbxxxaavbxabb
1bru_P_1981bru   P200211NCQGANGQWQVHEEE-TTS-EEEExbxxaagxxbxa
1bu6_O_151bu6   O1930VVMDHDANIISVEEE-TTS-EEEEbbbxaavbxabb
1cqq_A_521cqq   A6172DLYNKNGIKLEIEEE-TTS-EEEExxbxaavxxavb
1cv8_*_1191cv8   -127138NAKLNNGQEVIIEEEETTS-EEEEbbbxaavxbbbx
1dd9_A_2031dd9   A207218PIRDKRGRVIGFEEE-TTS-EEEExxbxaavxxabb
1dix_A_1581dix   A161172CNVDQSGNSQLYEEE-TTS-EEEEbbbxaavxxbxa
1dym_A_2661dym   A272283FLANRRGKLEKIEEE-TTS-EEEEbxbxaavbpabb
1e39_A_2761e39   A281292VLKDDKGTVKGIEEE-TTS-EEEExxbxaavbxaeb
1eax_A_1981eax   A200211SSVEADGRIFQAEEE-TTS-EEEEbbxxaavxxbxa
1eg7_A_12581eg7   A12591270LVQTLENTPAFIEEEETT--EEEExbbxaavxwbbb
1evl_A_4651evl   A469480TLYDCLDRAWQCEEE-TT--EEEExbbxaavxxbxa
1f1s_A_2231f1s   A228239KISDKSGKIIKEEEE-TT--EEEExbbbaavxxabb
1foh_A_821foh   A8697YNPDENGHIRRTEEE-TT--EEEEbbxxaavxxbxa
1g2l_A_301g2l   A3243LLINEENEGFCGEEE-TTS-EEEEbxbxaavbxabb
1gg6_B_301gg6   B3243SLQDKTGFHFCGEEE-TT--EEEEbxbxaavxxabb
1h16_A_5431h16   A546557PIRDEDGLAIDFEEE-TTS-EEEExbbxaavxxabb
1h2w_A_4351h2w   A441452FYPSKDGTKIPMEEE-TTS-EEEEbbxxaavxxbwb
1h6l_A_1821h6l   A188199LNADKNGYISGKEEE-TTSSEEEExbxxaavbbbbb
1iic_A_3111iic   A315326VVEQPDGKITDFEEE-TTS-EEEEbbbxaavxxabb
1itk_A_3311itk   A333344PEKGPGGAWQWAEEE-TTS-EEEExbxxaavbxbbb
1itw_A_4331itw   A436447RVTDESGKLLLEEEEETT--EEEEbbbxaavxxabb
1iyk_A_3161iyk   A320331VVEDENGIITDYEEE-TTS-EEEEbbbxaavxxabb
1j9j_A_1821j9j   A189200ERVSPFGEKYYWEEE-TTS-EEEExbbxaavxxbbb
1jof_A_1201jof   A124135FSVSETGKLEKNEEE-TT--EEEEbxbxaavxpabx
1jof_A_1681jof   A172183HRKLASGEVELVEEE-TTS-EEEEbbxxaagxbbxa
1jof_A_2831jof   A287298FKLRDCGSIEKQEEE-TTS-EEEEbbbxaagxxabx
1jq5_A_1291jq5   A131142VIYSDDGVFESYEEE-TTS-EEEEbxbxaavbpabb
1ju3_A_4591ju3   A465476VDVFPDGRAIALEEE-TTS-EEEEbbxxaagpbxxa
1ju3_A_61ju3   A1324MVPMRDGVRLAVEEE-TTS-EEEExbxxaavxbbxb
1kcf_A_521kcf   A5768ASQNEDSKVIIHEEE-TTS-EEEEbbxxaavxxbxa
1l1n_A_521l1n   A6172ALEDQAGTNLEIEEE-TTS-EEEExxbxaavxxavb
1mo9_A_2771mo9   A281292IEEDANGRVQAVEEE-TTSBEEEEbxbxaavbpabb
1mpy_A_1751mpy   A179190QVLDENGTRVAQEEE-TT--EEEEbbbxaavxxabb
1n8j_A_1191n8j   A122133FVVDPQGIIQAIEEE-TTSBEEEEbxbxaavxxabb
1nek_A_1641nek   A169180LVKNQDGAVVGCEEE-TTS-EEEExbxxaavbxbeb
1nek_A_3671nek   A369380LTVNEKGEDVVVEEE-SSS-EEEEbbxxaagxxbxb
1nj1_A_2171nj1   A222233DTLMPDGKTLQIEEE-TTS-EEEEbbbxaavxxbxa
1nui_A_1041nui   A110121DYRDQNGNIVSQEEE-TTS-EEEExxxxaalxxabb
1ocv_A_981ocv   A101112FRFNGAGKVVSMEEE-TTS-EEEEbbbxaavxxabb
1od2_A_15371od2   A15421553LIEDENGELTEVEEE-SSS-EEEEbbxxaavxxbxb
1onw_A_3561onw   A357368LVMTPELRIEQVEEE-TT--EEEEbbbxaavbxabb
1os8_A_1981os8   A200211FRKDNADEWIQVEEE-TTS-EEEEbbxxaalbxbxa
1oyg_A_3111oyg   A316327IELNDDYTLKKVEEE-TTSSEEEEbxbxaavxxabx
1p1j_A_251p1j   A3748VTKTASGRFDVTEEE-TTS-EEEEbbbxaavbxxbb
1pq7_A_1981pq7   A198209PIVDSSNTLIGAEEE-TT--EEEExbbxaavxxabb
1psq_A_1281psq   A130141FVLDTDNTIRYVEEE-TT-BEEEEbbxxaavxxabb
1qo8_A_2711qo8   A276287LVVNDDHSVVGAEEE-TTSBEEEExbbxaalbxaeb
1qq2_A_1281qq2   A131142FIIDDKGILRQIEEE-TTSBEEEEbxbxaavxxabb
1sox_A_2371sox   A243254LDADPGGAPYGAEEE-TT--EEEEaxbxaagxwxbb
1svp_A_1151svp   A117128DVKNEDGDVIGHEEE-TTS-EEEExbbxaavxxaeb
2ovw_A_2662ovw   A272283FVANKQGDLIELEEE-TTS-EEEEbxbxaavxxabb
3rp2_A_303rp2   A3445DIVTEKGLRVICEEE-TTS-EEEEbbxxaavbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aut_C_301aut   C     MAIDEOXO-METHYLARGININE A - 41
1aut_C_301aut   C     MAIDEOXO-METHYLARGININE C - 42
1cqq_A_521cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER K - 69
1cqq_A_521cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER E - 71
1cv8_*_1191cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE G - 119
1cv8_*_1191cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE H - 120
1cv8_*_1191cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE A - 121
1e39_A_2761e39   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 276
1e39_A_2761e39   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 277
1e39_A_2761e39   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 278
1e39_A_2761e39   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 279
1eax_A_1981eax   A     BENBENZAMIDINE V - 213
1evl_A_4651evl   A     TSB5'-O-(N-(L-THREONYL)-SULFAMOYL)ADENOSINE K - 465
1evl_A_4651evl   A     TSB5'-O-(N-(L-THREONYL)-SULFAMOYL)ADENOSINE Q - 479
1evl_A_4651evl   A     TSB5'-O-(N-(L-THREONYL)-SULFAMOYL)ADENOSINE C - 480
1evl_A_4651evl   A     TSB5'-O-(N-(L-THREONYL)-SULFAMOYL)ADENOSINE G - 481
1evl_A_4651evl   A     TSB5'-O-(N-(L-THREONYL)-SULFAMOYL)ADENOSINE T - 482
1evl_A_4651evl   A     ZNZINC ION Q - 484
1evl_A_4651evl   A     TSB5'-O-(N-(L-THREONYL)-SULFAMOYL)ADENOSINE Q - 484
1gg6_B_301gg6   B     APLN-(1-BENZYL-3,3,3-TRIFLUORO-2,2-DIHYDROXY-PROPYL)-ACETAMIDE Q - 34
1gg6_B_301gg6   B     APLN-(1-BENZYL-3,3,3-TRIFLUORO-2,2-DIHYDROXY-PROPYL)-ACETAMIDE T - 37
1gg6_B_301gg6   B     APLN-(1-BENZYL-3,3,3-TRIFLUORO-2,2-DIHYDROXY-PROPYL)-ACETAMIDE G - 38
1gg6_B_301gg6   B     APLN-(1-BENZYL-3,3,3-TRIFLUORO-2,2-DIHYDROXY-PROPYL)-ACETAMIDE F - 39
1gg6_B_301gg6   B     APF1,1,1-TRIFLUORO-3-ACETAMIDO-4-PHENYL BUTAN-2-ONE(N-ACETYL-L-PHENYLALANYL TRIFLUOROMETHYL KETONE) F - 41
1gg6_B_301gg6   B     APF1,1,1-TRIFLUORO-3-ACETAMIDO-4-PHENYL BUTAN-2-ONE(N-ACETYL-L-PHENYLALANYL TRIFLUOROMETHYL KETONE) C - 42
1jof_A_1201jof   A     MSESELENOMETHIONINE Y - 139
1jof_A_1681jof   A     MSESELENOMETHIONINE L - 169
1jof_A_1681jof   A     MSESELENOMETHIONINE T - 171
1jof_A_1681jof   A     MSESELENOMETHIONINE V - 183
1jof_A_1681jof   A     MSESELENOMETHIONINE G - 184
1jof_A_1681jof   A     MSESELENOMETHIONINE S - 185
1jof_A_1681jof   A     MSESELENOMETHIONINE V - 186
1jof_A_2831jof   A     MSESELENOMETHIONINE I - 284
1jof_A_2831jof   A     MSESELENOMETHIONINE A - 285
1jof_A_2831jof   A     MSESELENOMETHIONINE G - 286
1jof_A_2831jof   A     MSESELENOMETHIONINE F - 287
1jof_A_2831jof   A     MSESELENOMETHIONINE K - 288
1jof_A_2831jof   A     MSESELENOMETHIONINE L - 289
1jof_A_2831jof   A     MSESELENOMETHIONINE I - 295
1jq5_A_1291jq5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 129
1jq5_A_1291jq5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 130
1jq5_A_1291jq5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 131
1jq5_A_1291jq5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 133
1mpy_A_1751mpy   A     ACNACETONE F - 191
1nek_A_1641nek   A     FADFLAVIN-ADENINE DINUCLEOTIDE W - 164
1nek_A_1641nek   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 165
1nek_A_1641nek   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 166
1nek_A_1641nek   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 167
1nj1_A_2171nj1   A     5CA5'-O-(N-(L-CYSTEINYL)-SULFAMOYL)ADENOSINE Q - 232
1nj1_A_2171nj1   A     5CA5'-O-(N-(L-CYSTEINYL)-SULFAMOYL)ADENOSINE I - 233
1nj1_A_2171nj1   A     5CA5'-O-(N-(L-CYSTEINYL)-SULFAMOYL)ADENOSINE G - 234
1nj1_A_2171nj1   A     5CA5'-O-(N-(L-CYSTEINYL)-SULFAMOYL)ADENOSINE T - 235
1nj1_A_2171nj1   A     5CA5'-O-(N-(L-CYSTEINYL)-SULFAMOYL)ADENOSINE H - 237
1oyg_A_3111oyg   A     CACALCIUM ION G - 311
1oyg_A_3111oyg   A     EDO1,2-ETHANEDIOL Y - 322
1oyg_A_3111oyg   A     EDO1,2-ETHANEDIOL T - 323
1oyg_A_3111oyg   A     EDO1,2-ETHANEDIOL L - 324
1pq7_A_1981pq7   A     ARGARGININE V - 210
1pq7_A_1981pq7   A     ARGARGININE S - 211
1pq7_A_1981pq7   A     ARGARGININE W - 212
1qo8_A_2711qo8   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 271
1qo8_A_2711qo8   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 272
1qo8_A_2711qo8   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 273
1qo8_A_2711qo8   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 274
1sox_A_2371sox   A     MTEPHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7, 8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER E - 241
1sox_A_2371sox   A     MTEPHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7, 8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER G - 242
1sox_A_2371sox   A     MTEPHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7, 8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER L - 243
1sox_A_2371sox   A     MTEPHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7, 8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER D - 244
1sox_A_2371sox   A     MTEPHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7, 8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER Y - 252
2ovw_A_2662ovw   A     NAGN-ACETYL-D-GLUCOSAMINE K - 276
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1cv8_*_1191cv8   * NULCATALYTIC TRIAD.H - 120

Clusters included in this Subclass
CLUSTER: HA.4.14
CLUSTER: HA.4.22
CLUSTER: HA.5.23
CLUSTER: HA.6.3