Information on SUBCLASS 5.1.3 |
Subclass Accession number: 7921
Subclass: 5.1.3 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 38 Average sequence ID (%) : 15.3 +/- 16.9 Average RMSD (Å) : 0.734 +/- 0.115 Consensus geometry
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Consensus Sequence: | hXpXpGpXX |
(φψ)-conformation: | bbpaagpbb |
Pattern: | x | [acfgiltv] | x | [degnst] | x | [adeknqrst] | [dgkns] | [dehknpqrst] | x | [afgiklmtv] | x | [acfgikltv] |
Conservation: | -0.699 | -0.378 | -0.258 | 0.629 | -0.314 | 0.484 | 2.829 | 0.069 | -0.762 | -0.309 | -0.818 | -0.471 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a1r_A_168 | 1a1r | A | 168 | 179 | PLLCPTGHAVGL | EEE-TTS-EEEE | xbxxaavxxabb |
1abr_A_212 | 1abr | A | 218 | 229 | TLTNIRNEPVIV | EEE-TTS-EEEE | xbbxaavbpbxb |
1agj_A_198 | 1agj | A | 198 | 209 | GIFNSNGELVGI | EEE-TTSEEEEE | xbbxaavxxabb |
1arb_*_197 | 1arb | - | 197 | 208 | PIYSPEKRVLGQ | EEE-TTS-EEEE | xbbxaavbxaeb |
1aut_C_30 | 1aut | C | 32 | 43 | VLLDSKKKLACG | EEE-TTS-EEEE | bxxxaavbxabb |
1bqb_A_2 | 1bqb | A | 6 | 17 | TGKGVLGDTKDI | EEE-TTS-EEEE | bbxxaavxbbxb |
1bru_P_198 | 1bru | P | 200 | 211 | NCQGANGQWQVH | EEE-TTS-EEEE | xbxxaagxxbxa |
1dtd_A_389 | 1dtd | A | 394 | 405 | IGSSFENRPMNV | EEE-TT--EEEE | aebxaavxxxbb |
1e9i_A_9 | 1e9i | A | 10 | 21 | EIIDSRGNPTVE | EEE-TTS-EEEE | bbbxaavbwbxb |
1eax_A_198 | 1eax | A | 200 | 211 | SSVEADGRIFQA | EEE-TTS-EEEE | bbxxaavxxbxa |
1ep5_A_229 | 1ep5 | A | 229 | 240 | PILDNQGRVVAI | EEE-TTS-EEEE | xbbxaavxxabb |
1eur_*_221 | 1eur | - | 226 | 237 | TIINAAGAFQAV | EEE-TT--EEEE | bbbxaavxxbbb |
1f52_A_16 | 1f52 | A | 20 | 31 | RFTDTKGKEQHV | EEE-TTS-EEEE | bbbxaagxxbbb |
1f89_A_109 | 1f89 | A | 114 | 125 | IIFNEDGKLIDK | EEE-TTS-EEEE | xbbbaagxxabb |
1foh_A_82 | 1foh | A | 86 | 97 | YNPDENGHIRRT | EEE-TT--EEEE | bbxxaavxxbxa |
1gg6_B_30 | 1gg6 | B | 32 | 43 | SLQDKTGFHFCG | EEE-TT--EEEE | bxbxaavxxabb |
1h5r_A_147 | 1h5r | A | 149 | 160 | VEFDKNGTAISL | EEE-TTS-EEEE | bbbxaavxxabb |
1i1n_A_189 | 1i1n | A | 194 | 205 | YDKLQDGSIKMK | EEE-TTS-EEEE | bbbxaavxbbbb |
1i7d_A_220 | 1i7d | A | 227 | 238 | HIVTPADERFTA | EEE-TT--EEEE | xxbxaavxbbbb |
1jq5_A_129 | 1jq5 | A | 131 | 142 | VIYSDDGVFESY | EEE-TTS-EEEE | bxbxaavbpabb |
1jqp_A_49 | 1jqp | A | 49 | 60 | TAYDEVGNSGYF | EEE-SSS-EEEE | xbbxaavxbbbb |
1kei_A_4 | 1kei | A | 9 | 20 | VGRGVLGDQKNI | EEE-TTS-EEEE | bbbxaavxxbxb |
1kop_A_108 | 1kop | A | 113 | 124 | VHLDENKQPLVL | EEE-TT--EEEE | xbbxaavxwbbb |
1ky9_A_213 | 1ky9 | A | 213 | 224 | ALVNLNGELIGI | EEE-TTS-EEEE | xbbxaavxxaeb |
1lml_*_226 | 1lml | - | 230 | 241 | CQTFSDGHPAVG | EEE-TTS-EEEE | abbxaavxwabb |
1m4l_A_33 | 1m4l | A | 38 | 49 | IGRSYEGRPIYV | EEE-TTS-EEEE | aebxaavxxbbb |
1nek_A_367 | 1nek | A | 369 | 380 | LTVNEKGEDVVV | EEE-SSS-EEEE | bbxxaagxxbxb |
1nn6_A_30 | 1nn6 | A | 34 | 45 | EIVTSNGPSKFC | EEE-TTS-EEEE | bbxxaaGpbbbb |
1od2_A_1537 | 1od2 | A | 1542 | 1553 | LIEDENGELTEV | EEE-SSS-EEEE | bbxxaavxxbxb |
1od4_A_1537 | 1od4 | A | 1542 | 1553 | LIEDENGELTEV | EEE-TTS-EEEE | bbxxaavxxbxb |
1pq7_A_198 | 1pq7 | A | 198 | 209 | PIVDSSNTLIGA | EEE-TT--EEEE | xbbxaavxxabb |
1prx_A_133 | 1prx | A | 135 | 146 | FVFGPDKKLKLS | EEE-TTSBEEEE | bbbxaavxxabb |
1qau_A_104 | 1qau | A | 109 | 120 | TTFTGDGTPKTI | EEE-TT--EEEE | bbbxaavxwbxb |
1qtf_A_189 | 1qtf | A | 189 | 200 | GIFNLKGELIGI | EEE-TT--EEEE | xbbbaavxxaeb |
1rlv_A_118 | 1rlv | A | 120 | 131 | AVVDEESEITYF | EEE-TTS-EEEE | xxbxaavxbbxb |
1svp_A_218 | 1svp | A | 218 | 229 | PIMDNSGRVVAI | EEE-TTS-EEEE | xbbbaavxxabb |
1vcp_A_222 | 1vcp | A | 222 | 233 | PIFDNKGRVVAI | EEE-TTS-EEEE | xbxbaavxxabb |
3rp2_A_30 | 3rp2 | A | 34 | 45 | DIVTEKGLRVIC | EEE-TTS-EEEE | bbxxaavbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1a1r_A_168 | 1a1r | A | ZN1ZINC BINDING SITE, MOLECULE A. | C - 171 |
1agj_A_198 | 1agj | A | SNACATALYTIC TETRAD OF SERINE PROTEASE. | S - 211 |
Clusters included in this Subclass |
CLUSTER: HA.4.32 |
CLUSTER: HA.4.55 |
CLUSTER: HA.5.15 |
CLUSTER: HA.5.40 |
CLUSTER: HA.6.6 |