Information on SUBCLASS 5.1.4 |
Subclass Accession number: 7922
Subclass: 5.1.4 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 13 Average sequence ID (%) : 20.4 +/- 19.5 Average RMSD (Å) : 0.431 +/- 0.138 Consensus geometry
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Consensus Sequence: | XXXXcGpXX |
(φψ)-conformation: | bbpaagpbb |
Pattern: | x | x | x | [adegkrs] | [DNY] | [EGS] | [DHKNSTY] | [fiklt] | x |
Conservation: | -0.606 | -0.749 | -0.718 | -0.326 | 1.454 | 1.953 | -0.003 | -0.408 | -0.596 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1amu_A_407 | 1amu | A | 416 | 424 | RWLSDGNIE | EE-TTS-EE | bxxaavxxb |
1b6r_A_160 | 1b6r | A | 167 | 175 | ARGFDGSTV | EE-TTS-EE | bbbaavxbb |
1g9g_A_450 | 1g9g | A | 450 | 458 | KFNADGTFQ | EE-TTS-EE | bbxaavxbb |
1ga6_A_221 | 1ga6 | A | 223 | 231 | GLDSNGKLW | EE-TTS-EE | exxaavxxb |
1gpm_A_128 | 1gpm | A | 128 | 136 | ALTADGKPL | EE-TTS-EE | bbxaavxwb |
1l1y_A_478 | 1l1y | A | 478 | 486 | KLYDDGTFA | EE-TTS-EE | bbbaavxbb |
1lci_*_418 | 1lci | - | 425 | 433 | YWDEDEHFF | EE-TT--EE | bbxaavxxb |
1lqy_A_72 | 1lqy | A | 77 | 85 | VTDENGTLY | EE-TTS-EE | bbxaavxxb |
1m6k_A_199 | 1m6k | A | 201 | 209 | QDLDNSTKL | EE-TTS-EE | bbxaavxxb |
1mdb_A_409 | 1mdb | A | 416 | 424 | RLTRDGYIV | EE-TTS-EE | bbxaavxbb |
1o9l_A_403 | 1o9l | A | 403 | 411 | QVSKYGDLA | EE-TTS-EE | bbxaagpbb |
1oew_A_67 | 1oew | A | 76 | 84 | ISYGDGSSS | EE-TTS-EE | bbbaavxbb |
1qho_A_646 | 1qho | A | 653 | 661 | IKRADGTIQ | EE-TTS-EE | xbxaavxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oew_A_67 | 1oew | A | AC2THR BINDING SITE FOR CHAIN A | S - 77 |
1oew_A_67 | 1oew | A | AC1SER BINDING SITE FOR CHAIN A | Y - 78 |
1oew_A_67 | 1oew | A | AC1SER BINDING SITE FOR CHAIN A | G - 79 |
Clusters included in this Subclass |
CLUSTER: HA.4.39 |
CLUSTER: HA.5.86 |
CLUSTER: HA.6.17 |