Information on SUBCLASS 5.1.7 |
Subclass Accession number: 7925
Subclass: 5.1.7 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 32.1 +/- 24.8 Average RMSD (Å) : 0.400 +/- 0.361 Consensus geometry
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Consensus Sequence: | hXNXpGpXX |
(φψ)-conformation: | bbpaagpbb |
Pattern: | x | [flw] | [ikv] | [N] | [AEK] | [DEKNQ] | [GN] | [dek] | x | [fhv] | [nwy] | [cv] |
Conservation: | -0.782 | -0.552 | -0.495 | 2.513 | -0.167 | 0.019 | 1.330 | -0.149 | -0.987 | -0.658 | 0.348 | -0.420 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4e_A_217 | 1a4e | A | 218 | 229 | KWSNKNGDWHYV | EEE-TTS-EEEE | bbbxaagxbbxb |
1dgf_A_220 | 1dgf | A | 221 | 232 | KLVNANGEAVYC | EEE-TTS-EEEE | bbbxaavxbbxb |
1e93_A_199 | 1e93 | A | 200 | 211 | SFINKDNERFWV | EEE-TT--EEEE | bbbxaavxbbxb |
1gwe_A_205 | 1gwe | A | 206 | 217 | LWVNAQGEKHWV | EEE-TT--EEEE | bbbxaavxbbxb |
1kqf_A_146 | 1kqf | A | 146 | 157 | IEKNEQGVTVNR | EEE-TTS-EEEE | babxaavxxalb |
1m7s_A_222 | 1m7s | A | 223 | 234 | KLVNAKGEVHYV | EEE-TTS-EEEE | bxbxaavxbbxb |
1p80_A_277 | 1p80 | A | 278 | 289 | RLINAEGKATFV | EEE-TT--EEEE | bbbxaavxbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dgf_A_220 | 1dgf | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | H - 235 |
1dgf_A_220 | 1dgf | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | K - 237 |
1e93_A_199 | 1e93 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | Y - 199 |
Clusters included in this Subclass |
CLUSTER: HA.4.41 |