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Information on SUBCLASS 5.2.1
Subclass Accession number: 7927
Subclass: 5.2.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 28

Average sequence ID (%) : 14.8 +/- 16.7
Average RMSD (Å) : 0.443 +/- 0.160

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXpXpXpXh
(φψ)-conformation: bbpaalabb
Pattern: x[afiklmtv][cdnqsty]x[denqst][egkqrs][adekqrst]x[afilmtv][acfgilvwy]
Conservation:-1.145-0.3810.036-0.8052.3120.5170.615-0.8020.144-0.490
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bf2_*_81bf2   -1019SYDAQQANITEE-TTSSEEEbxxaalabbb
1bo1_B_1391bo1   B140149LTTYDRRFVIEE-TTSSEEEbbpaaUabbb
1cjx_A_1981cjx   A204213MSAPDGMIRIEE-TTSS-EExbxaavaxbb
1dl2_A_4141dl2   A414423WRSSVGDFFVEE-SSSSEEExbxaavabbb
1f1s_A_7451f1s   A752761FTNWDRTLTAEE-TTSSEEExbxaavabbb
1f6w_A_661f6w   A6675QATITQDSTYEE-TTSSSEEbxxaalabbb
1fwx_A_1901fwx   A191200DADYEGKWAFEE-SSSSEEEbbxaavabbb
1fwx_A_2721fwx   A273282NMAPDKKHLCEE-TTSSEEEbxxaavabbb
1gpr_*_581gpr   -6271NVFPTKHAIGEE-TTSSEEEbbpaavabbb
1h2w_A_1251h2w   A131140AFSEDGEYFAEE-TTSSEEEbxxaavabbb
1h2w_A_1761h2w   A177186AWTHDGKGMFEE-TTSSEEEbxxaavabbx
1h2w_A_2351h2w   A239248ELSDDGRYVLEE-TTS-EEEbxxaavabxb
1ji1_A_641ji1   A6776SNDPTGTFDYEE-TTSSEEEbbxaavabbb
1jz7_A_2241jz7   A230239RFNDDFSRAVEE-TTSSEEEbbxaavabbb
1k32_A_4071k32   A411420GVDRNGKFAVEE-TTSSEEEbbxaavabbb
1k32_A_5001k32   A504513AFDADSKNLYEE-TTS-EEEbxxaalabbb
1k32_A_801k32   A8594RFFPDGRKIAEE-TTSSEEEbxxaavabbx
1lwd_A_2911lwd   A295304LVCPDGKTIEEE-TTSS-EExbxaavaxbb
1mai_*_371mai   -4352KLQEDCKTIWEE-TTSSEEEbxxaalabbx
1n6a_A_1411n6a   A146155YVYPDERTALEE-TTSSEEEbbxaalaxbb
1n7o_A_6511n7o   A657666FTNWNQTLTAEE-TTSSEEExbxaalabbb
1pfq_A_1041pfq   A106115SISPDGQFILEE-TTSSEEEbxpaavabbb
1qks_A_1991qks   A203212RLSASGRYLFEE-TTS-EEEbbxaavabbb
1qks_A_3441qks   A348357GLDGSHRYFIEE-TTS-EEEbxxaavabxb
1qks_A_5041qks   A509518EFNKDGTEVWEE-TTSSEEEbxxaavabbb
1umw_A_4411umw   A443452ILYNDGDSLQEE-TTSSEEEbbxaavaxbb
2bbk_H_1292bbk   H130139SLTPDGKTLLEE-TTSSEEEbbxaavabbb
2bc2_A_82bc2   A918IKNETGTISIEE-TTSSEEEbbxaavabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cjx_A_1981cjx   A     FE2FE (II) ION P - 214
1cjx_A_1981cjx   A     ACTACETATE ION P - 214
1cjx_A_1981cjx   A     ACTACETATE ION N - 216
1jz7_A_2241jz7   A     DMSDIMETHYL SULFOXIDE V - 227
1jz7_A_2241jz7   A     DMSDIMETHYL SULFOXIDE A - 228
1jz7_A_2241jz7   A     DMSDIMETHYL SULFOXIDE T - 229
1jz7_A_2241jz7   A     DMSDIMETHYL SULFOXIDE R - 230
1jz7_A_2241jz7   A     DMSDIMETHYL SULFOXIDE D - 233
1jz7_A_2241jz7   A     CEAS-HYDROXY-CYSTEINE Q - 245
1lwd_A_2911lwd   A     ICTISOCITRIC ACID S - 293
1lwd_A_2911lwd   A     ICTISOCITRIC ACID E - 306
1mai_*_371mai   *     I3PD-MYO-INOSITOL-1,4,5-TRIPHOSPHATE R - 38
1mai_*_371mai   *     I3PD-MYO-INOSITOL-1,4,5-TRIPHOSPHATE R - 40
1mai_*_371mai   *     I3PD-MYO-INOSITOL-1,4,5-TRIPHOSPHATE Y - 42
1n6a_A_1411n6a   A     MSESELENOMETHIONINE G - 141
1n6a_A_1411n6a   A     MSESELENOMETHIONINE I - 144
1n6a_A_1411n6a   A     MSESELENOMETHIONINE A - 145
1n6a_A_1411n6a   A     MSESELENOMETHIONINE Y - 146
1n6a_A_1411n6a   A     MSESELENOMETHIONINE R - 152
1n6a_A_1411n6a   A     MSESELENOMETHIONINE L - 155
1n6a_A_1411n6a   A     MSESELENOMETHIONINE K - 158
1n6a_A_1411n6a   A     MSESELENOMETHIONINE F - 159
1qks_A_1991qks   A     DHEHEME D V - 199
1qks_A_1991qks   A     DHEHEME D H - 200
1qks_A_1991qks   A     DHEHEME D I - 201
1qks_A_1991qks   A     DHEHEME D R - 203
1qks_A_3441qks   A     DHEHEME D H - 345
1qks_A_3441qks   A     DHEHEME D D - 346
1qks_A_5041qks   A     DHEHEME D V - 506
1qks_A_5041qks   A     DHEHEME D Q - 507
1qks_A_5041qks   A     DHEHEME D G - 508
1qks_A_5041qks   A     DHEHEME D E - 509
1qks_A_5041qks   A     DHEHEME D W - 522

Clusters included in this Subclass
CLUSTER: HA.4.12
CLUSTER: HA.5.8